Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.71□□□□□ -1.33
CHMP4CQ96CF2 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CHMP4CQ96CF2 AC068870.1-201ENST00000563737 2455 ntBASIC6.71□□□□□ -1.33
CHMP4CQ96CF2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
CHMP4CQ96CF2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AC013262.1-201ENST00000426710 252 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AL390119.1-201ENST00000440329 312 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AL096829.2-201ENST00000446582 742 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 OR5H3P-201ENST00000502817 919 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AC138866.2-201ENST00000508650 584 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 RNU6-615P-201ENST00000516065 106 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AC109635.6-201ENST00000525487 1113 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AC137627.1-201ENST00000545761 289 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 H3F3BP2-201ENST00000583907 357 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AC104695.2-201ENST00000605056 775 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AC034229.4-201ENST00000607861 441 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 RNA5SP439-201ENST00000617595 124 ntBASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHMP4CQ96CF2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 YES1P1-201ENST00000418510 1628 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 MTND4P11-201ENST00000417020 1058 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 RPL34P3-201ENST00000421454 338 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 RPS27P5-201ENST00000444247 244 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 LINC02210-201ENST00000444561 288 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC023271.1-201ENST00000445936 1090 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC073909.1-201ENST00000447112 999 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 DUTP7-201ENST00000507982 486 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 PMS2P3-207ENST00000529061 717 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC087894.1-201ENST00000538359 518 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC139697.1-201ENST00000548429 745 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 HSPE1P2-201ENST00000554777 306 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 RPAP2P1-201ENST00000603626 1168 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC109309.2-201ENST00000612597 332 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC078880.5-201ENST00000617845 421 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 MTCO1P7-201ENST00000419523 1542 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 AC007342.7-201ENST00000624610 2337 ntBASIC6.7□□□□□ -1.34
CHMP4CQ96CF2 CASC19-281ENST00000642118 1554 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms