Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.71□□□□□ -1.18
HLA-CQ95604 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC7.71□□□□□ -1.18
HLA-CQ95604 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.71□□□□□ -1.18
HLA-CQ95604 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-CQ95604 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-CQ95604 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-CQ95604 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-CQ95604 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
HLA-CQ95604 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 AC079949.2-201ENST00000617117 2933 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
HLA-CQ95604 AL592429.1-201ENST00000403909 1473 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-CQ95604 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
HLA-CQ95604 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
HLA-CQ95604 STAG3L4-201ENST00000352103 530 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 SNORD35A-201ENST00000363389 86 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 RNU6-115P-201ENST00000364310 107 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 SNORA62.2-201ENST00000364672 152 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 RN7SKP91-201ENST00000410852 288 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 RNA5SP155-201ENST00000411154 129 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-CQ95604 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.7□□□□□ -1.18
HLA-CQ95604 Z82205.1-201ENST00000428456 297 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 SRIP2-201ENST00000428470 166 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 AL606489.2-201ENST00000433886 234 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.7□□□□□ -1.18
HLA-CQ95604 AC009237.4-201ENST00000441078 238 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-CQ95604 AC007383.1-201ENST00000445875 636 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-CQ95604 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 RPS27P23-201ENST00000487608 251 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC7.7□□□□□ -1.18
HLA-CQ95604 GAPDHP56-201ENST00000506031 988 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 RNU6-1046P-201ENST00000516538 107 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 AC011853.1-201ENST00000518911 454 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.7□□□□□ -1.18
HLA-CQ95604 AP003072.2-201ENST00000527756 676 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 NANOGNBP2-201ENST00000544753 553 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 NDUFA3P4-201ENST00000560814 250 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC7.7□□□□□ -1.18
HLA-CQ95604 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.7□□□□□ -1.18
HLA-CQ95604 AC100830.2-201ENST00000581636 240 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.7□□□□□ -1.18
HLA-CQ95604 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-CQ95604 AC016629.2-201ENST00000597341 199 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-CQ95604 AC009027.1-201ENST00000604510 479 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 AC016925.2-201ENST00000605108 242 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.7□□□□□ -1.18
HLA-CQ95604 AC097641.3-201ENST00000613523 464 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 AC087894.3-201ENST00000623682 349 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-CQ95604 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-CQ95604 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-CQ95604 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-CQ95604 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
HLA-CQ95604 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 LARP1BP1-201ENST00000506036 1359 ntBASIC7.7□□□□□ -1.18
HLA-CQ95604 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-CQ95604 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
HLA-CQ95604 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-CQ95604 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
HLA-CQ95604 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC7.69□□□□□ -1.18
HLA-CQ95604 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.69□□□□□ -1.18
HLA-CQ95604 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC7.69□□□□□ -1.18
HLA-CQ95604 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.69□□□□□ -1.18
HLA-CQ95604 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
HLA-CQ95604 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 RN7SKP23-201ENST00000625159 4301 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.69□□□□□ -1.18
HLA-CQ95604 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 LRRC37A17P-201ENST00000570311 4693 ntBASIC7.69□□□□□ -1.18
HLA-CQ95604 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-CQ95604 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
HLA-CQ95604 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms