Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC092121.1-201ENST00000569452 202 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 SUMO2P14-201ENST00000604488 293 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 AC239803.2-201ENST00000610161 430 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 AC129915.3-201ENST00000634128 948 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTP4A1Q93096 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC100757.1-201ENST00000616872 1835 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTP4A1Q93096 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTP4A1Q93096 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTP4A1Q93096 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTP4A1Q93096 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTP4A1Q93096 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC083843.3-201ENST00000623679 2186 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC011155.1-201ENST00000316512 456 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 RNU1-150P-201ENST00000362491 162 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 RNU6-452P-201ENST00000384406 107 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 PPIAP9-201ENST00000403866 498 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 RPS3AP2-201ENST00000407190 754 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTP4A1Q93096 HMGN1P20-201ENST00000411849 300 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC013404.1-201ENST00000413068 249 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC092570.3-201ENST00000420113 693 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 AL358176.3-201ENST00000420757 454 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 NPM1P24-201ENST00000428039 894 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 BX323845.3-201ENST00000428215 527 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 ZNF965P-201ENST00000432501 817 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 NPM1P33-201ENST00000438918 872 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 DNAJA1P5-201ENST00000440278 943 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 HMGN1P2-201ENST00000445197 310 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 AP006222.1-205ENST00000450734 457 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC114781.3-201ENST00000512083 142 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC005363.1-201ENST00000530779 351 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 NOP56P3-201ENST00000549457 385 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC025175.1-201ENST00000606482 759 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC090948.2-201ENST00000607363 564 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AL096712.1-201ENST00000614561 159 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 WBP1LP8-201ENST00000617401 327 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.97□□□□□ -1.61
PTP4A1Q93096 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTP4A1Q93096 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTP4A1Q93096 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTP4A1Q93096 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
PTP4A1Q93096 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.96□□□□□ -1.61
PTP4A1Q93096 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
PTP4A1Q93096 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.96□□□□□ -1.61
PTP4A1Q93096 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.61
PTP4A1Q93096 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTP4A1Q93096 NEPNP-201ENST00000404786 1371 ntBASIC4.96□□□□□ -1.62
PTP4A1Q93096 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTP4A1Q93096 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PTP4A1Q93096 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTP4A1Q93096 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PTP4A1Q93096 SNORA64.1-201ENST00000362600 132 ntBASIC4.96□□□□□ -1.62
PTP4A1Q93096 SNORA62.2-201ENST00000364672 152 ntBASIC4.96□□□□□ -1.62
PTP4A1Q93096 RNU6-40P-201ENST00000384254 107 ntBASIC4.96□□□□□ -1.62
PTP4A1Q93096 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTP4A1Q93096 GABARAPL3-201ENST00000412799 354 ntBASIC4.96□□□□□ -1.62
PTP4A1Q93096 SLC20A1P1-201ENST00000413906 956 ntBASIC4.96□□□□□ -1.62
PTP4A1Q93096 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.96□□□□□ -1.62
PTP4A1Q93096 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.96□□□□□ -1.62
PTP4A1Q93096 RPL34P6-201ENST00000432390 345 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms