Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
SIMC1Q8NDZ2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
SIMC1Q8NDZ2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SIMC1Q8NDZ2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 RNA5SP453-201ENST00000362503 119 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 RNU6-225P-201ENST00000384613 103 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AL138880.1-201ENST00000405824 642 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 RNU6-648P-201ENST00000410190 107 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 ZNF619P1-201ENST00000446539 752 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 RN7SKP35-201ENST00000517210 151 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 OR6M2P-201ENST00000529831 871 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC002519.2-203ENST00000567043 837 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC027455.1-201ENST00000574104 594 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC027243.2-201ENST00000602530 724 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AL138895.2-201ENST00000603019 178 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC025588.2-201ENST00000604851 466 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AL158042.1-201ENST00000605338 460 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AL139407.1-201ENST00000613826 1175 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AL512652.1-201ENST00000619006 500 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC026124.2-201ENST00000621847 656 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC093875.1-201ENST00000623688 504 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AC099654.6-201ENST00000636487 512 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AL357140.4-201ENST00000636827 412 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIMC1Q8NDZ2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 TCP11X1-202ENST00000622971 1372 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 PSG10P-201ENST00000501199 1500 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC017079.1-201ENST00000333650 415 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 RNU6-354P-201ENST00000383862 107 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 RNU6-610P-201ENST00000384264 107 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 SNORD116-4-201ENST00000384733 96 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 MIR320B1-201ENST00000390209 79 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 ADAM24P-201ENST00000398655 2101 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 RN7SKP151-201ENST00000410230 316 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 RN7SKP97-201ENST00000410966 333 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 RN7SKP144-201ENST00000411108 279 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AL096829.1-201ENST00000413677 457 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 RPS29P14-201ENST00000431518 171 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AL365220.1-201ENST00000432923 399 ntBASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIMC1Q8NDZ2 AL359265.1-201ENST00000440296 795 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms