Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AL592494.2-201ENST00000425455 1548 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 RNU4-7P-201ENST00000364758 141 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 CYB5AP4-201ENST00000396692 399 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 PTGES3P2-201ENST00000407942 482 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AC016397.1-201ENST00000412463 242 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 MRPS21P2-201ENST00000424704 264 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 UBE2V1P6-201ENST00000430840 422 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 ARAFP2-201ENST00000440565 559 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AL157827.1-201ENST00000447622 132 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 RPS3AP41-201ENST00000462701 778 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AC078857.1-201ENST00000469870 667 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AC090114.3-201ENST00000479267 829 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AC116562.1-201ENST00000485355 781 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AC105233.1-201ENST00000498840 781 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 MTCYBP19-201ENST00000517463 1124 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AL512310.9-201ENST00000553311 948 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 RPL10P14-201ENST00000565265 298 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AC021483.2-201ENST00000567415 758 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 MIR4330-201ENST00000579077 105 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 ZNF92P2-201ENST00000600543 1059 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AC095055.1-201ENST00000603472 1113 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AC004241.3-201ENST00000611728 517 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AC012618.3-205ENST00000637896 1496 ntBASIC5.96□□□□□ -1.46
HERC6Q8IVU3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
HERC6Q8IVU3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 SNORA16A-201ENST00000384342 137 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 CHMP1B2P-201ENST00000399581 597 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 RN7SKP17-201ENST00000411242 351 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 SRSF1P1-201ENST00000424058 520 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 RPS6P14-201ENST00000425165 719 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC104837.2-201ENST00000427236 424 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 RBMY2TP-201ENST00000451162 947 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 MTND2P6-201ENST00000455337 1030 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC104629.1-201ENST00000494226 508 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 TOMM22P4-201ENST00000511318 336 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC078899.1-201ENST00000521432 1185 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC113192.3-201ENST00000529152 742 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC092490.3-201ENST00000545370 572 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 PCNPP1-201ENST00000552501 511 ntBASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.95□□□□□ -1.46
HERC6Q8IVU3 AC127381.1-201ENST00000555979 939 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms