Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 AL591379.1-207ENST00000635982 261 ntBASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 AC005005.4-201ENST00000623789 16698 ntBASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 AL022311.1-201ENST00000623726 19416 ntBASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 AP000473.2-201ENST00000602659 1537 ntBASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 SSXP3-201ENST00000442971 1300 ntBASIC4.97□□□□□ -1.61
LINC00346Q8IVM7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LINC00346Q8IVM7 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
LINC00346Q8IVM7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
LINC00346Q8IVM7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
LINC00346Q8IVM7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
LINC00346Q8IVM7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LINC00346Q8IVM7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 SNORA64.1-201ENST00000362600 132 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 RNA5SP433-201ENST00000364491 114 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 RNA5SP30-201ENST00000365552 115 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 RNU6-317P-201ENST00000384031 107 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 U3.28-201ENST00000391249 210 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AP002784.2-201ENST00000397300 549 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC023271.1-201ENST00000445936 1090 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 NXT1P1-201ENST00000458481 316 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 SNORD125-201ENST00000459538 96 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 RN7SL197P-201ENST00000466981 299 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 CYCSP20-201ENST00000473154 315 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 RPL7P40-201ENST00000481703 745 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC022215.1-201ENST00000481770 362 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 TPT1P3-201ENST00000492841 512 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 IGLVIV-64-201ENST00000518581 301 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 OR5AK3P-201ENST00000527486 1297 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AL049830.4-201ENST00000555149 351 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC015802.2-201ENST00000589690 189 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC021851.1-201ENST00000608537 1082 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC253576.2-201ENST00000618815 580 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC068880.4-201ENST00000623082 495 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 MRRFP1-201ENST00000435941 1675 ntBASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LINC00346Q8IVM7 AC007938.2-201ENST00000604666 2634 ntBASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 AC017007.4-201ENST00000503353 1352 ntBASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 GAPDHP24-201ENST00000328713 983 ntBASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LINC00346Q8IVM7 AC211486.3-201ENST00000412694 621 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms