Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 AL133406.3-201ENST00000606817 541 ntBASIC4.95□□□□□ -1.62
CCDC71Q8IV32 BNIP3P41-202ENST00000616656 861 ntBASIC4.95□□□□□ -1.62
CCDC71Q8IV32 MIR6839-201ENST00000620425 113 ntBASIC4.95□□□□□ -1.62
CCDC71Q8IV32 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC71Q8IV32 SMG1P4-204ENST00000523028 4131 ntBASIC4.95□□□□□ -1.62
CCDC71Q8IV32 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RPL23P2-201ENST00000320371 421 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RNU1-146P-201ENST00000364015 165 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RN7SKP6-201ENST00000364795 319 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RNU6-891P-201ENST00000384280 111 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RPL12P43-201ENST00000420608 499 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RPL12P3-201ENST00000440080 396 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RN7SL222P-201ENST00000476452 299 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RPS23P1-201ENST00000491662 432 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RPEP1-201ENST00000504507 658 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 OR4A46P-201ENST00000527255 933 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 AC126177.5-201ENST00000549599 178 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 MIR3691-201ENST00000578066 90 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 MIR4700-201ENST00000578311 74 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 AC022884.2-201ENST00000578535 580 ntBASIC4.94□□□□□ -1.62
CCDC71Q8IV32 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC71Q8IV32 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 RNA5SP183-201ENST00000362452 119 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 RNA5SP335-201ENST00000363817 110 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 MIR585-201ENST00000384887 94 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 MIR551A-201ENST00000385042 96 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 DBIP1-201ENST00000401435 260 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 RN7SKP213-201ENST00000410746 298 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 OR52B5P-201ENST00000435337 951 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 XKRYP6-201ENST00000440468 1116 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 XKRYP3-201ENST00000442113 1116 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 SUMO2P1-206ENST00000445436 284 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AL356390.1-201ENST00000455684 397 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AC093827.1-201ENST00000480094 861 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 RN7SL591P-201ENST00000496150 292 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 MTND2P17-201ENST00000550281 688 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AC245128.3-201ENST00000594721 748 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC71Q8IV32 AL356752.1-201ENST00000615844 593 ntBASIC4.93□□□□□ -1.62
CCDC71Q8IV32 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms