Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 RNA5SP435-201ENST00000364044 108 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 VDAC2P1-201ENST00000399358 958 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 RPL23AP39-201ENST00000415533 405 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AL354707.3-201ENST00000427308 331 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AC008072.1-201ENST00000434254 824 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 RPL7P59-201ENST00000447700 943 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 HMGB1P4-201ENST00000455362 567 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AP002453.1-201ENST00000492327 668 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 HMGB3P13-201ENST00000511263 607 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AC004217.3-201ENST00000551552 878 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 FXNP1-201ENST00000555153 337 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AL138895.2-201ENST00000603019 178 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AC128687.1-201ENST00000605304 619 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 RPSAP75-201ENST00000605848 301 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AC092354.1-201ENST00000606057 376 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AC034229.6-201ENST00000623704 224 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 MKKS-204ENST00000639674 192 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AC099063.3-201ENST00000642066 185 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AC022031.1-201ENST00000585985 2593 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 AL034417.4-202ENST00000642135 2236 ntBASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AP005139.1-201ENST00000580702 1647 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 RNU6-492P-201ENST00000363035 104 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 SUGT1P1-201ENST00000379514 476 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AL139098.1-201ENST00000407291 389 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 MIR1204-201ENST00000408388 67 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 RBMY3AP-201ENST00000449381 1145 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC022431.1-201ENST00000450941 438 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 RPL37P3-201ENST00000456825 293 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC093899.1-201ENST00000457984 376 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC009963.3-201ENST00000458090 486 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 RPL7AP52-201ENST00000458096 790 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 RN7SL221P-201ENST00000466190 281 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 CCDC75P1-201ENST00000469247 791 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms