Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.55□□□□□ -1.68
LRRC28Q86X40 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LRRC28Q86X40 MIR1269B-201ENST00000580405 75 ntBASIC4.55□□□□□ -1.68
LRRC28Q86X40 RNF138P2-201ENST00000603490 592 ntBASIC4.55□□□□□ -1.68
LRRC28Q86X40 AL162431.4-201ENST00000604674 411 ntBASIC4.55□□□□□ -1.68
LRRC28Q86X40 AL512329.2-201ENST00000607350 548 ntBASIC4.55□□□□□ -1.68
LRRC28Q86X40 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.55□□□□□ -1.68
LRRC28Q86X40 SNORD91B-202ENST00000608459 222 ntBASIC4.55□□□□□ -1.68
LRRC28Q86X40 AC008115.4-201ENST00000619780 775 ntBASIC4.55□□□□□ -1.68
LRRC28Q86X40 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.55□□□□□ -1.68
LRRC28Q86X40 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.55□□□□□ -1.68
LRRC28Q86X40 MAPK10-349ENST00000641767 3661 ntBASIC4.55□□□□□ -1.68
LRRC28Q86X40 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.55□□□□□ -1.68
LRRC28Q86X40 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LRRC28Q86X40 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.55□□□□□ -1.68
LRRC28Q86X40 SCN1A-220ENST00000641603 12506 ntBASIC4.55□□□□□ -1.68
LRRC28Q86X40 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 AP000542.2-201ENST00000623199 6179 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 MIR133B-201ENST00000362210 119 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC28Q86X40 AL133388.1-201ENST00000404509 287 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 AL035079.1-201ENST00000405210 287 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 AL390316.1-201ENST00000406279 553 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 U3.32-201ENST00000408116 212 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 MIR1178-201ENST00000408396 91 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 FAM96AP1-201ENST00000430879 482 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 AL161722.2-201ENST00000434731 981 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 GAPDHP25-201ENST00000447061 1001 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC28Q86X40 AC002553.2-201ENST00000453217 340 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC28Q86X40 COPS8P2-201ENST00000473228 627 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 PGAM1P13-201ENST00000507497 754 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 RNU6-1334P-201ENST00000516032 105 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 RNA5SP34-201ENST00000516887 130 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC28Q86X40 AC005341.1-201ENST00000571086 708 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC28Q86X40 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 AC107993.1-201ENST00000591343 684 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 OR8G7P-201ENST00000616658 848 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC28Q86X40 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 MAPK10-320ENST00000641462 6696 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.54□□□□□ -1.68
LRRC28Q86X40 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC28Q86X40 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LRRC28Q86X40 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC28Q86X40 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC28Q86X40 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC28Q86X40 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 MIR223-201ENST00000385204 110 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 RNA5SP339-201ENST00000390987 122 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 RPS26P4-201ENST00000431743 355 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 AL591363.1-201ENST00000450091 483 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 RPS26P41-201ENST00000450370 284 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 AL356981.1-201ENST00000454879 684 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 AC020890.1-201ENST00000491837 504 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 RPEP1-201ENST00000504507 658 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 ENPP7P9-201ENST00000514456 627 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 AL358913.1-201ENST00000554342 121 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 AC015660.5-201ENST00000623238 564 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC28Q86X40 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC28Q86X40 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC28Q86X40 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC28Q86X40 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.53□□□□□ -1.68
LRRC28Q86X40 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC28Q86X40 DDX18P6-201ENST00000450119 1997 ntBASIC4.53□□□□□ -1.68
LRRC28Q86X40 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.53□□□□□ -1.69
LRRC28Q86X40 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRC28Q86X40 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRC28Q86X40 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms