Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MIR133B-201ENST00000362210 119 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 HSPA8P15-201ENST00000401676 786 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 OR3A2-201ENST00000408891 1076 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 RN7SKP59-201ENST00000410520 314 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 RPL23AP4-201ENST00000427757 463 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 PPIAP20-201ENST00000449839 135 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 RPL7P45-201ENST00000455851 743 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 SIAH1P1-201ENST00000479411 923 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 RPL7P41-201ENST00000485823 957 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 HMGB1P40-201ENST00000525121 540 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AC087888.1-201ENST00000550884 1254 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 LSM3P2-201ENST00000551246 273 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 RBM22P1-201ENST00000578589 1214 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 BMS1P7-201ENST00000602440 1052 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 HMGB1P51-201ENST00000605166 638 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AC007204.2-201ENST00000615022 616 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 SAMMSON-209ENST00000641222 1100 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 AL121950.1-201ENST00000624993 2077 ntBASIC4.79□□□□□ -1.64
NIPAL3Q6P499 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NIPAL3Q6P499 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 RNA5SP335-201ENST00000363817 110 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 RNA5SP132-201ENST00000364725 118 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 U3.25-201ENST00000391209 220 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC009804.1-201ENST00000400949 179 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 DHFRP5-201ENST00000406944 564 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 RN7SKP206-201ENST00000410823 293 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC211486.3-201ENST00000412694 621 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AL133325.1-201ENST00000421090 382 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC022022.1-201ENST00000430304 178 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 RPL12P18-201ENST00000437175 325 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 CYCSP12-201ENST00000437729 300 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 RPS11P7-201ENST00000442125 465 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 TXNP2-201ENST00000443918 295 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 NOP56P2-201ENST00000447491 769 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC037198.2-201ENST00000478845 733 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 RN7SL447P-201ENST00000494711 245 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC108693.1-201ENST00000496068 432 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 NIFKP7-201ENST00000503365 834 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 RPL7L1P4-201ENST00000513004 707 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC020937.1-201ENST00000519677 1013 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AP002373.2-201ENST00000541631 1060 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC022387.2-201ENST00000604050 448 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC021106.3-201ENST00000623925 531 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC004817.4-201ENST00000602396 3625 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC110792.3-201ENST00000595906 1614 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC027228.2-201ENST00000567141 2154 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AL450345.1-202ENST00000605741 3881 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AC023421.1-201ENST00000590535 1785 ntBASIC4.78□□□□□ -1.64
NIPAL3Q6P499 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms