Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AL355802.4-201ENST00000607635 548 ntBASIC5.73□□□□□ -1.49
SNX30Q5VWJ9 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SNX30Q5VWJ9 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX30Q5VWJ9 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
SNX30Q5VWJ9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX30Q5VWJ9 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
SNX30Q5VWJ9 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX30Q5VWJ9 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX30Q5VWJ9 AC006206.1-201ENST00000544842 3387 ntBASIC5.73□□□□□ -1.49
SNX30Q5VWJ9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SNX30Q5VWJ9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX30Q5VWJ9 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 SNORA70.6-201ENST00000383934 134 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 RNA5SP339-201ENST00000390987 122 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AL356057.1-202ENST00000402263 756 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AL136131.1-201ENST00000406079 803 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 Z86062.1-201ENST00000406773 777 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC019070.1-201ENST00000415008 1024 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 RPA2P2-201ENST00000419698 796 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC073464.3-201ENST00000422564 712 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 OR6K4P-201ENST00000423179 955 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 SRSF1P1-201ENST00000424058 520 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 RPL12P17-201ENST00000432393 498 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 MTCYBP12-201ENST00000440559 1134 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 SUMO2P1-206ENST00000445436 284 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC017099.1-201ENST00000448261 1028 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AL672138.1-201ENST00000450604 1015 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 HSPE1P22-201ENST00000456856 327 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 RN7SKP99-201ENST00000517028 307 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 OR8X1P-201ENST00000534542 869 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC009237.13-201ENST00000603193 276 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 RPL21P136-201ENST00000605378 396 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC034236.3-201ENST00000605999 461 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC008115.4-201ENST00000619780 775 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC074140.1-201ENST00000621617 208 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 AL590763.1-201ENST00000398297 1545 ntBASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX30Q5VWJ9 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SNX30Q5VWJ9 AC097461.1-201ENST00000568928 2821 ntBASIC5.71□□□□□ -1.49
SNX30Q5VWJ9 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SNX30Q5VWJ9 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SNX30Q5VWJ9 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 RAD1P1-201ENST00000231383 813 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 MIR133B-201ENST00000362210 119 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 RNU6-171P-201ENST00000384354 107 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 RNU6-31P-201ENST00000384388 108 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 RNU1-77P-201ENST00000390868 162 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AL133325.1-201ENST00000421090 382 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 CYCSP6-201ENST00000434498 302 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AL627308.1-201ENST00000435693 821 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 RN7SL188P-201ENST00000469842 285 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 RN7SL799P-201ENST00000475891 298 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 RN7SL30P-201ENST00000488416 306 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 RPEP1-201ENST00000504507 658 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms