Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AL137845.2-201ENST00000444292 988 ntBASIC4.53□□□□□ -1.68
FOXF1Q12946 AC012512.1-201ENST00000446594 718 ntBASIC4.53□□□□□ -1.68
FOXF1Q12946 snoU13.20-201ENST00000459180 104 ntBASIC4.53□□□□□ -1.68
FOXF1Q12946 COX6B1P2-201ENST00000489624 230 ntBASIC4.53□□□□□ -1.68
FOXF1Q12946 RN7SL244P-201ENST00000493405 297 ntBASIC4.53□□□□□ -1.68
FOXF1Q12946 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXF1Q12946 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXF1Q12946 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXF1Q12946 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXF1Q12946 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXF1Q12946 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.53□□□□□ -1.68
FOXF1Q12946 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXF1Q12946 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXF1Q12946 NPM1P45-201ENST00000583151 559 ntBASIC4.53□□□□□ -1.68
FOXF1Q12946 MIR3936-201ENST00000584304 110 ntBASIC4.53□□□□□ -1.68
FOXF1Q12946 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXF1Q12946 OR7A8P-201ENST00000595427 913 ntBASIC4.53□□□□□ -1.68
FOXF1Q12946 AC005377.1-201ENST00000605126 456 ntBASIC4.53□□□□□ -1.68
FOXF1Q12946 EIF3FP1-201ENST00000613970 806 ntBASIC4.53□□□□□ -1.68
FOXF1Q12946 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
FOXF1Q12946 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXF1Q12946 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXF1Q12946 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXF1Q12946 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
FOXF1Q12946 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXF1Q12946 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXF1Q12946 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXF1Q12946 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXF1Q12946 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.53□□□□□ -1.69
FOXF1Q12946 AC011447.7-201ENST00000624228 1590 ntBASIC4.53□□□□□ -1.69
FOXF1Q12946 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
FOXF1Q12946 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXF1Q12946 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXF1Q12946 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXF1Q12946 CR383656.5-201ENST00000547616 1340 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXF1Q12946 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
FOXF1Q12946 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXF1Q12946 MIR105-2-201ENST00000385083 81 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 AL078599.1-201ENST00000402075 293 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 NPM1P40-201ENST00000412758 733 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 AF186996.5-201ENST00000418098 904 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 AC013429.2-201ENST00000418798 781 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 RBMY2QP-201ENST00000429799 1147 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 CEACAMP7-201ENST00000444105 496 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 AC093166.2-201ENST00000455969 1017 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 TPT1P1-201ENST00000458495 518 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 RPL37AP8-201ENST00000494116 276 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 USP9YP2-201ENST00000504503 1000 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXF1Q12946 USP9YP1-201ENST00000513521 1002 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 AC110775.1-201ENST00000513721 462 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXF1Q12946 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXF1Q12946 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXF1Q12946 AC019206.1-201ENST00000621938 425 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXF1Q12946 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXF1Q12946 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
FOXF1Q12946 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXF1Q12946 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXF1Q12946 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXF1Q12946 AC020633.1-201ENST00000468439 2247 ntBASIC4.52□□□□□ -1.69
FOXF1Q12946 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXF1Q12946 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXF1Q12946 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.51□□□□□ -1.69
FOXF1Q12946 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXF1Q12946 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXF1Q12946 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXF1Q12946 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
FOXF1Q12946 AC007996.1-201ENST00000620414 2821 ntBASIC4.51□□□□□ -1.69
FOXF1Q12946 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.51□□□□□ -1.69
FOXF1Q12946 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
FOXF1Q12946 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
FOXF1Q12946 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXF1Q12946 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXF1Q12946 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.51□□□□□ -1.69
FOXF1Q12946 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXF1Q12946 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXF1Q12946 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXF1Q12946 SNORA73.1-201ENST00000363107 205 ntBASIC4.51□□□□□ -1.69
FOXF1Q12946 Z97832.1-201ENST00000402490 328 ntBASIC4.51□□□□□ -1.69
FOXF1Q12946 AL136116.2-201ENST00000404020 785 ntBASIC4.51□□□□□ -1.69
FOXF1Q12946 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXF1Q12946 MRPL35P2-201ENST00000448009 511 ntBASIC4.51□□□□□ -1.69
FOXF1Q12946 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXF1Q12946 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXF1Q12946 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.51□□□□□ -1.69
FOXF1Q12946 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.51□□□□□ -1.69
FOXF1Q12946 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.51□□□□□ -1.69
FOXF1Q12946 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.51□□□□□ -1.69
FOXF1Q12946 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.51□□□□□ -1.69
FOXF1Q12946 AC116553.2-201ENST00000564203 463 ntBASIC4.51□□□□□ -1.69
FOXF1Q12946 AC211433.2-201ENST00000608433 387 ntBASIC4.51□□□□□ -1.69
FOXF1Q12946 AP000648.2-201ENST00000624182 404 ntBASIC4.51□□□□□ -1.69
FOXF1Q12946 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXF1Q12946 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXF1Q12946 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms