Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 RNU1-149P-201ENST00000390870 161 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 AC104297.1-201ENST00000393779 870 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3AQ05086 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AC093162.1-201ENST00000419682 124 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 AC007161.1-204ENST00000423039 460 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AL365220.1-201ENST00000432923 399 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3AQ05086 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.85□□□□□ -1.47
UBE3AQ05086 RN7SL860P-201ENST00000473738 223 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3AQ05086 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AC116562.1-201ENST00000485355 781 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.85□□□□□ -1.47
UBE3AQ05086 TOMM22P4-201ENST00000511318 336 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 RNU6-941P-201ENST00000516346 108 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AC013701.1-201ENST00000522657 465 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 HIGD1AP5-201ENST00000529959 259 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3AQ05086 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.85□□□□□ -1.47
UBE3AQ05086 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.85□□□□□ -1.47
UBE3AQ05086 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 RBM22P1-201ENST00000578589 1214 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.85□□□□□ -1.47
UBE3AQ05086 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AC090617.9-201ENST00000623751 147 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3AQ05086 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3AQ05086 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3AQ05086 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AL355834.1-201ENST00000556602 3965 ntBASIC5.85□□□□□ -1.47
UBE3AQ05086 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.85□□□□□ -1.47
UBE3AQ05086 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3AQ05086 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3AQ05086 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3AQ05086 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
UBE3AQ05086 AC114947.2-201ENST00000565748 2125 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 AL359715.3-201ENST00000569267 2123 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UBE3AQ05086 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UBE3AQ05086 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.84□□□□□ -1.47
UBE3AQ05086 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UBE3AQ05086 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.84□□□□□ -1.47
UBE3AQ05086 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
UBE3AQ05086 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
UBE3AQ05086 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.84□□□□□ -1.47
UBE3AQ05086 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 RNU6-609P-201ENST00000365459 107 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UBE3AQ05086 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
UBE3AQ05086 RPL23AP17-201ENST00000401064 499 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 AL133388.1-201ENST00000404509 287 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.84□□□□□ -1.47
UBE3AQ05086 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.84□□□□□ -1.47
UBE3AQ05086 RNGTTP1-201ENST00000420965 728 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.84□□□□□ -1.47
UBE3AQ05086 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.84□□□□□ -1.47
UBE3AQ05086 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.84□□□□□ -1.47
UBE3AQ05086 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.84□□□□□ -1.47
UBE3AQ05086 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.84□□□□□ -1.47
UBE3AQ05086 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.84□□□□□ -1.47
UBE3AQ05086 RPS3AP38-201ENST00000435889 763 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.84□□□□□ -1.47
UBE3AQ05086 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.84□□□□□ -1.47
UBE3AQ05086 MTCYBP12-201ENST00000440559 1134 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UBE3AQ05086 MTND2P39-201ENST00000457230 764 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 SLC25A51P1-201ENST00000468432 871 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 BX284632.1-201ENST00000478218 541 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.84□□□□□ -1.47
UBE3AQ05086 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.84□□□□□ -1.47
UBE3AQ05086 MTND6P2-201ENST00000512226 524 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UBE3AQ05086 PCNPP1-201ENST00000552501 511 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.84□□□□□ -1.47
UBE3AQ05086 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.84□□□□□ -1.47
UBE3AQ05086 OR11J2P-201ENST00000555298 907 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.84□□□□□ -1.47
UBE3AQ05086 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.84□□□□□ -1.47
UBE3AQ05086 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.84□□□□□ -1.47
UBE3AQ05086 AC011840.5-201ENST00000582125 771 ntBASIC5.84□□□□□ -1.47
UBE3AQ05086 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms