Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK3Q00526 MIR3691-201ENST00000578066 90 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 TAS2R6P-201ENST00000605022 826 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 AC005021.1-201ENST00000608730 355 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 AC092574.1-201ENST00000609771 420 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 AC073575.2-201ENST00000614212 627 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK3Q00526 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK3Q00526 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK3Q00526 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK3Q00526 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDK3Q00526 AC092070.2-203ENST00000598377 3644 ntBASIC5.22□□□□□ -1.57
CDK3Q00526 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CDK3Q00526 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CDK3Q00526 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDK3Q00526 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDK3Q00526 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK3Q00526 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDK3Q00526 SNORD115-48-201ENST00000364764 76 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 SNORD51.1-201ENST00000365405 77 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 SNORA70.6-201ENST00000383934 134 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 MIR765-201ENST00000390226 114 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 U3.36-201ENST00000408418 213 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 RN7SKP126-201ENST00000411143 300 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 AC073464.3-201ENST00000422564 712 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 MTND4P24-201ENST00000424002 397 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 AC124944.2-201ENST00000429866 1242 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 RPS26P4-201ENST00000431743 355 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK3Q00526 PTMAP6-201ENST00000439110 327 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 AC009127.1-201ENST00000467090 155 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 OR9N1P-202ENST00000494289 481 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 MTND3P24-201ENST00000506306 329 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 AC093770.1-201ENST00000511559 571 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK3Q00526 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK3Q00526 HMGN2P6-201ENST00000551091 273 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 HMGN2P47-201ENST00000559378 272 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 SNORD39.2-201ENST00000579995 76 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK3Q00526 MIR7853-201ENST00000584820 132 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK3Q00526 AL021707.7-201ENST00000607991 416 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 AC106730.3-201ENST00000624568 641 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK3Q00526 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDK3Q00526 AC017002.4-201ENST00000604721 1525 ntBASIC5.21□□□□□ -1.58
CDK3Q00526 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK3Q00526 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
CDK3Q00526 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDK3Q00526 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK3Q00526 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDK3Q00526 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK3Q00526 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK3Q00526 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
CDK3Q00526 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK3Q00526 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDK3Q00526 U3.3-201ENST00000362986 216 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 OR6K3-202ENST00000368146 996 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 RNU1-106P-201ENST00000384382 164 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 RN7SKP213-201ENST00000410746 298 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 RPL23AP27-201ENST00000415161 451 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK3Q00526 AL158827.1-201ENST00000416300 391 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK3Q00526 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK3Q00526 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK3Q00526 XKRY2-201ENST00000442362 1093 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK3Q00526 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK3Q00526 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK3Q00526 AL161722.1-201ENST00000446972 1032 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 MTND2P30-201ENST00000456663 382 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 AC108751.3-201ENST00000461814 1020 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 CBX1P5-201ENST00000475330 559 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 RPSAP50-201ENST00000481955 852 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK3Q00526 RPS24P16-201ENST00000497294 392 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 HMGB1P3-201ENST00000502802 616 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK3Q00526 MTCO1P31-201ENST00000506355 492 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 AC008628.1-201ENST00000508663 265 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 SNORA26.10-201ENST00000516427 141 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 SEPT10P1-201ENST00000517342 1162 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 AC012400.1-201ENST00000518452 381 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CDK3Q00526 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK3Q00526 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK3Q00526 AL136520.1-202ENST00000555494 763 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK3Q00526 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK3Q00526 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK3Q00526 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.2□□□□□ -1.58
CDK3Q00526 AL583832.1-201ENST00000603227 784 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 AC009597.2-201ENST00000604659 592 ntBASIC5.2□□□□□ -1.58
CDK3Q00526 AC135803.1-201ENST00000608748 565 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms