Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.21□□□□□ -1.58
CBX1P83916 AL359922.3-201ENST00000624779 1670 ntBASIC5.21□□□□□ -1.58
CBX1P83916 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CBX1P83916 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.21□□□□□ -1.58
CBX1P83916 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CBX1P83916 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.2□□□□□ -1.58
CBX1P83916 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CBX1P83916 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.2□□□□□ -1.58
CBX1P83916 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CBX1P83916 Y_RNA.62-201ENST00000362840 99 ntBASIC5.2□□□□□ -1.58
CBX1P83916 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.2□□□□□ -1.58
CBX1P83916 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.2□□□□□ -1.58
CBX1P83916 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.2□□□□□ -1.58
CBX1P83916 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.2□□□□□ -1.58
CBX1P83916 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.2□□□□□ -1.58
CBX1P83916 AL139158.1-201ENST00000424719 340 ntBASIC5.2□□□□□ -1.58
CBX1P83916 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.2□□□□□ -1.58
CBX1P83916 RPS26P28-201ENST00000470806 348 ntBASIC5.2□□□□□ -1.58
CBX1P83916 RN7SL57P-201ENST00000493687 290 ntBASIC5.2□□□□□ -1.58
CBX1P83916 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CBX1P83916 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CBX1P83916 AP004607.2-201ENST00000533949 322 ntBASIC5.2□□□□□ -1.58
CBX1P83916 BTG1P1-201ENST00000540396 508 ntBASIC5.2□□□□□ -1.58
CBX1P83916 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.2□□□□□ -1.58
CBX1P83916 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.2□□□□□ -1.58
CBX1P83916 DUX4L52-201ENST00000549363 777 ntBASIC5.2□□□□□ -1.58
CBX1P83916 AC006530.1-201ENST00000555980 571 ntBASIC5.2□□□□□ -1.58
CBX1P83916 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CBX1P83916 AP005901.4-201ENST00000577336 569 ntBASIC5.2□□□□□ -1.58
CBX1P83916 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.2□□□□□ -1.58
CBX1P83916 AL136131.3-201ENST00000607600 188 ntBASIC5.2□□□□□ -1.58
CBX1P83916 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.2□□□□□ -1.58
CBX1P83916 AC020634.1-201ENST00000608701 549 ntBASIC5.2□□□□□ -1.58
CBX1P83916 AC073389.3-201ENST00000609434 935 ntBASIC5.2□□□□□ -1.58
CBX1P83916 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.2□□□□□ -1.58
CBX1P83916 AL158062.1-201ENST00000619632 745 ntBASIC5.2□□□□□ -1.58
CBX1P83916 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CBX1P83916 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.2□□□□□ -1.58
CBX1P83916 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.2□□□□□ -1.58
CBX1P83916 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CBX1P83916 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CBX1P83916 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CBX1P83916 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.2□□□□□ -1.58
CBX1P83916 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CBX1P83916 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
CBX1P83916 MAPK10-286ENST00000641208 8747 ntBASIC5.19□□□□□ -1.58
CBX1P83916 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CBX1P83916 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CBX1P83916 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CBX1P83916 MTCO1P15-201ENST00000529569 1526 ntBASIC5.19□□□□□ -1.58
CBX1P83916 AP001002.1-201ENST00000625148 1513 ntBASIC5.19□□□□□ -1.58
CBX1P83916 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.19□□□□□ -1.58
CBX1P83916 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.19□□□□□ -1.58
CBX1P83916 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CBX1P83916 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CBX1P83916 MIR708-201ENST00000390708 88 ntBASIC5.19□□□□□ -1.58
CBX1P83916 GAPDHP15-201ENST00000398586 975 ntBASIC5.19□□□□□ -1.58
CBX1P83916 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.19□□□□□ -1.58
CBX1P83916 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CBX1P83916 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.19□□□□□ -1.58
CBX1P83916 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.19□□□□□ -1.58
CBX1P83916 MTCO1P51-201ENST00000427672 1060 ntBASIC5.19□□□□□ -1.58
CBX1P83916 RBMY2TP-201ENST00000451162 947 ntBASIC5.19□□□□□ -1.58
CBX1P83916 AL359839.1-201ENST00000451975 1160 ntBASIC5.19□□□□□ -1.58
CBX1P83916 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CBX1P83916 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.19□□□□□ -1.58
CBX1P83916 HMGN1P16-201ENST00000508308 283 ntBASIC5.19□□□□□ -1.58
CBX1P83916 HMGN1P17-201ENST00000513734 295 ntBASIC5.19□□□□□ -1.58
CBX1P83916 NPM1P52-201ENST00000518264 846 ntBASIC5.19□□□□□ -1.58
CBX1P83916 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.19□□□□□ -1.58
CBX1P83916 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.19□□□□□ -1.58
CBX1P83916 NDUFB4P11-201ENST00000560510 395 ntBASIC5.19□□□□□ -1.58
CBX1P83916 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.19□□□□□ -1.58
CBX1P83916 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.19□□□□□ -1.58
CBX1P83916 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.19□□□□□ -1.58
CBX1P83916 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.19□□□□□ -1.58
CBX1P83916 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.19□□□□□ -1.58
CBX1P83916 FAM27E2-201ENST00000619668 403 ntBASIC5.19□□□□□ -1.58
CBX1P83916 AL136228.1-201ENST00000622221 319 ntBASIC5.19□□□□□ -1.58
CBX1P83916 AL356121.2-201ENST00000624715 780 ntBASIC5.19□□□□□ -1.58
CBX1P83916 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
CBX1P83916 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.19□□□□□ -1.58
CBX1P83916 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CBX1P83916 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CBX1P83916 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.19□□□□□ -1.58
CBX1P83916 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CBX1P83916 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.18□□□□□ -1.58
CBX1P83916 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.18□□□□□ -1.58
CBX1P83916 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.18□□□□□ -1.58
CBX1P83916 DDX18P3-201ENST00000404856 2007 ntBASIC5.18□□□□□ -1.58
CBX1P83916 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CBX1P83916 AC012020.1-201ENST00000624541 1728 ntBASIC5.18□□□□□ -1.58
CBX1P83916 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CBX1P83916 MAPK10-304ENST00000641341 3984 ntBASIC5.18□□□□□ -1.58
CBX1P83916 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CBX1P83916 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CBX1P83916 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CBX1P83916 SNORA79B-201ENST00000410557 148 ntBASIC5.18□□□□□ -1.58
CBX1P83916 RNA5SP104-201ENST00000410989 118 ntBASIC5.18□□□□□ -1.58
CBX1P83916 RNU2-18P-201ENST00000411224 162 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms