Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX6-1P78426 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NKX6-1P78426 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NKX6-1P78426 AC123769.1-201ENST00000530992 3192 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX6-1P78426 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AC006042.3-201ENST00000454684 1469 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AC006511.3-201ENST00000624929 1783 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NKX6-1P78426 MFSD8-219ENST00000641228 2559 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
NKX6-1P78426 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NKX6-1P78426 snoZ40.1-201ENST00000364540 72 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NKX6-1P78426 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX6-1P78426 SNORA17A-201ENST00000391185 133 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AL031985.1-201ENST00000392713 418 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AL050335.1-201ENST00000396909 869 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AP003170.5-201ENST00000397185 335 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AL356131.1-201ENST00000405826 414 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 RN7SKP59-201ENST00000410520 314 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.53□□□□□ -1.52
NKX6-1P78426 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 NANOGP4-201ENST00000427230 913 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.53□□□□□ -1.52
NKX6-1P78426 MTCO1P3-201ENST00000429327 192 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 RPL21P110-201ENST00000433345 446 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 RPL23AP19-201ENST00000436229 369 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX6-1P78426 CXCR2P1-202ENST00000443392 1074 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX6-1P78426 Z99714.1-201ENST00000450463 807 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX6-1P78426 NECAP1P2-201ENST00000455668 727 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 ANKRD26P4-201ENST00000455755 950 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX6-1P78426 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX6-1P78426 AC092824.1-201ENST00000483524 576 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX6-1P78426 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.53□□□□□ -1.52
NKX6-1P78426 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX6-1P78426 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX6-1P78426 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX6-1P78426 IGKV2-19-201ENST00000518132 283 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AC018442.3-201ENST00000523025 183 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.53□□□□□ -1.52
NKX6-1P78426 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.53□□□□□ -1.52
NKX6-1P78426 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX6-1P78426 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.53□□□□□ -1.52
NKX6-1P78426 DUXAP6-201ENST00000553858 601 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 TPRX1P1-201ENST00000557620 319 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX6-1P78426 RN7SL475P-201ENST00000583379 298 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AC090616.1-201ENST00000583895 447 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AL583832.1-201ENST00000603227 784 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AC131159.1-201ENST00000621854 213 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 AC015726.3-201ENST00000624501 418 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 SNORA17.5-201ENST00000630429 132 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AC125238.2-201ENST00000430003 1440 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX6-1P78426 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NKX6-1P78426 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.53□□□□□ -1.52
NKX6-1P78426 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
NKX6-1P78426 BX005019.1-201ENST00000561881 1810 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NKX6-1P78426 AC007342.5-201ENST00000571340 2142 ntBASIC5.53□□□□□ -1.52
NKX6-1P78426 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NKX6-1P78426 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX6-1P78426 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
NKX6-1P78426 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.52
NKX6-1P78426 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.52□□□□□ -1.53
NKX6-1P78426 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 EIF3EP1-201ENST00000433978 1316 ntBASIC5.52□□□□□ -1.53
NKX6-1P78426 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NKX6-1P78426 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms