Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.69□□□□□ -1.5
HDAC4P56524 AC097372.4-201ENST00000625025 466 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.69□□□□□ -1.5
HDAC4P56524 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.69□□□□□ -1.5
HDAC4P56524 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HDAC4P56524 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HDAC4P56524 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HDAC4P56524 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.69□□□□□ -1.5
HDAC4P56524 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HDAC4P56524 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HDAC4P56524 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.69□□□□□ -1.5
HDAC4P56524 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.68□□□□□ -1.5
HDAC4P56524 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
HDAC4P56524 RN7SKP124-201ENST00000364730 341 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 RPL10P10-201ENST00000403509 664 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 SNORA79B-201ENST00000410557 148 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 RN7SKP293-201ENST00000411389 296 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.68□□□□□ -1.5
HDAC4P56524 AC009784.1-201ENST00000426484 460 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.68□□□□□ -1.5
HDAC4P56524 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.68□□□□□ -1.5
HDAC4P56524 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.68□□□□□ -1.5
HDAC4P56524 Z99127.2-201ENST00000441426 334 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.68□□□□□ -1.5
HDAC4P56524 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.68□□□□□ -1.5
HDAC4P56524 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.68□□□□□ -1.5
HDAC4P56524 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.68□□□□□ -1.5
HDAC4P56524 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.68□□□□□ -1.5
HDAC4P56524 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.68□□□□□ -1.5
HDAC4P56524 SCARNA20.4-201ENST00000516969 131 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.68□□□□□ -1.5
HDAC4P56524 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.68□□□□□ -1.5
HDAC4P56524 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.68□□□□□ -1.5
HDAC4P56524 OR8G3P-201ENST00000533406 921 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.68□□□□□ -1.5
HDAC4P56524 AC007225.2-201ENST00000562529 256 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 AC015720.2-201ENST00000567709 334 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 FAM106CP-201ENST00000582212 507 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.68□□□□□ -1.5
HDAC4P56524 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.68□□□□□ -1.5
HDAC4P56524 AL133370.2-201ENST00000619934 439 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.68□□□□□ -1.5
HDAC4P56524 AP006248.3-201ENST00000623580 594 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.68□□□□□ -1.5
HDAC4P56524 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.68□□□□□ -1.5
HDAC4P56524 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.68□□□□□ -1.5
HDAC4P56524 PCAT14-202ENST00000627127 3935 ntBASIC5.68□□□□□ -1.5
HDAC4P56524 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HDAC4P56524 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.68□□□□□ -1.5
HDAC4P56524 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
HDAC4P56524 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
HDAC4P56524 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.68□□□□□ -1.5
HDAC4P56524 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
HDAC4P56524 BTBD10P1-201ENST00000549824 1352 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HDAC4P56524 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HDAC4P56524 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.67□□□□□ -1.5
HDAC4P56524 AC003973.3-201ENST00000624863 2822 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HDAC4P56524 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.67□□□□□ -1.5
HDAC4P56524 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.67□□□□□ -1.5
HDAC4P56524 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.67□□□□□ -1.5
HDAC4P56524 SMG1P7-201ENST00000565246 2704 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 RNU4-44P-201ENST00000363050 141 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 RNU6-1251P-201ENST00000364502 107 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 SNORA70.6-201ENST00000383934 134 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 RNU6-40P-201ENST00000384254 107 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.67□□□□□ -1.5
HDAC4P56524 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.67□□□□□ -1.5
HDAC4P56524 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.67□□□□□ -1.5
HDAC4P56524 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.67□□□□□ -1.5
HDAC4P56524 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.67□□□□□ -1.5
HDAC4P56524 AC073508.1-201ENST00000428866 656 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AL136231.1-201ENST00000429407 730 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AC023141.6-201ENST00000429418 337 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms