Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.54□□□□□ -1.68
CX3CR1P49238 AL591363.1-201ENST00000450091 483 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.54□□□□□ -1.68
CX3CR1P49238 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
CX3CR1P49238 AC012400.1-201ENST00000518452 381 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.54□□□□□ -1.68
CX3CR1P49238 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CR1P49238 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CR1P49238 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.54□□□□□ -1.68
CX3CR1P49238 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CR1P49238 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CR1P49238 MIR3614-201ENST00000581261 86 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 FAM106CP-201ENST00000582212 507 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.54□□□□□ -1.68
CX3CR1P49238 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CR1P49238 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.54□□□□□ -1.68
CX3CR1P49238 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.54□□□□□ -1.68
CX3CR1P49238 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.54□□□□□ -1.68
CX3CR1P49238 AL589674.2-201ENST00000604304 337 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 OR7M1P-201ENST00000608946 533 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 AC004477.3-201ENST00000614061 590 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 AL122125.1-201ENST00000616999 600 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.54□□□□□ -1.68
CX3CR1P49238 SNORA17.5-201ENST00000630429 132 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CR1P49238 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CX3CR1P49238 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
CX3CR1P49238 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CR1P49238 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CR1P49238 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 AC063976.2-201ENST00000425667 3556 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CX3CR1P49238 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CX3CR1P49238 RNA5SP90-201ENST00000364801 99 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CR1P49238 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 AL035079.1-201ENST00000405210 287 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CR1P49238 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.53□□□□□ -1.68
CX3CR1P49238 MARK2P12-201ENST00000420129 585 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CR1P49238 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CR1P49238 OR52E7P-201ENST00000452394 933 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 AC002553.2-201ENST00000453217 340 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 AC007386.1-201ENST00000455212 582 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 AC091180.1-201ENST00000462104 372 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CR1P49238 RPSAP39-201ENST00000467439 883 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.53□□□□□ -1.68
CX3CR1P49238 RN7SL717P-201ENST00000478343 297 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CR1P49238 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CR1P49238 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.53□□□□□ -1.68
CX3CR1P49238 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.53□□□□□ -1.68
CX3CR1P49238 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.53□□□□□ -1.68
CX3CR1P49238 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CR1P49238 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CR1P49238 AC073869.10-201ENST00000642016 354 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 AL022393.1-201ENST00000625142 1677 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 AC093775.1-201ENST00000624154 1868 ntBASIC4.53□□□□□ -1.68
CX3CR1P49238 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CX3CR1P49238 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CX3CR1P49238 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CR1P49238 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.53□□□□□ -1.68
CX3CR1P49238 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CR1P49238 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CX3CR1P49238 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CX3CR1P49238 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CX3CR1P49238 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CR1P49238 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CR1P49238 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CR1P49238 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CX3CR1P49238 SNORA67-201ENST00000384423 137 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AC009804.1-201ENST00000400949 179 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 AL078599.1-201ENST00000402075 293 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 MIR1271-201ENST00000408537 86 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.52□□□□□ -1.69
CX3CR1P49238 AL513325.1-201ENST00000417716 1034 ntBASIC4.52□□□□□ -1.69
CX3CR1P49238 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms