Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSR1P43307 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SSR1P43307 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.58□□□□□ -1.52
SSR1P43307 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SSR1P43307 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.58□□□□□ -1.52
SSR1P43307 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.58□□□□□ -1.52
SSR1P43307 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSR1P43307 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.58□□□□□ -1.52
SSR1P43307 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSR1P43307 AP001273.1-201ENST00000624493 3152 ntBASIC5.58□□□□□ -1.52
SSR1P43307 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSR1P43307 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.58□□□□□ -1.52
SSR1P43307 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSR1P43307 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.58□□□□□ -1.52
SSR1P43307 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SSR1P43307 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.58□□□□□ -1.52
SSR1P43307 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.58□□□□□ -1.52
SSR1P43307 RN7SKP153-201ENST00000365026 316 ntBASIC5.58□□□□□ -1.52
SSR1P43307 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSR1P43307 OR4K12P-201ENST00000406538 961 ntBASIC5.58□□□□□ -1.52
SSR1P43307 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.58□□□□□ -1.52
SSR1P43307 GTF2IP2-201ENST00000424290 697 ntBASIC5.58□□□□□ -1.52
SSR1P43307 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.58□□□□□ -1.52
SSR1P43307 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.58□□□□□ -1.52
SSR1P43307 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.58□□□□□ -1.52
SSR1P43307 AL162388.1-201ENST00000450912 352 ntBASIC5.58□□□□□ -1.52
SSR1P43307 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.58□□□□□ -1.52
SSR1P43307 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.58□□□□□ -1.52
SSR1P43307 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.58□□□□□ -1.52
SSR1P43307 RPL7P41-201ENST00000485823 957 ntBASIC5.58□□□□□ -1.52
SSR1P43307 RN7SL423P-201ENST00000486202 304 ntBASIC5.58□□□□□ -1.52
SSR1P43307 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.58□□□□□ -1.52
SSR1P43307 IMPA1P1-201ENST00000510718 842 ntBASIC5.58□□□□□ -1.52
SSR1P43307 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.58□□□□□ -1.52
SSR1P43307 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.58□□□□□ -1.52
SSR1P43307 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.58□□□□□ -1.52
SSR1P43307 AC022404.1-201ENST00000555320 273 ntBASIC5.58□□□□□ -1.52
SSR1P43307 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
SSR1P43307 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.58□□□□□ -1.52
SSR1P43307 OR1F2P-201ENST00000570470 933 ntBASIC5.58□□□□□ -1.52
SSR1P43307 RBM22P1-201ENST00000578589 1214 ntBASIC5.58□□□□□ -1.52
SSR1P43307 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.58□□□□□ -1.52
SSR1P43307 AC127024.5-201ENST00000580085 462 ntBASIC5.58□□□□□ -1.52
SSR1P43307 RN7SL52P-201ENST00000584271 284 ntBASIC5.58□□□□□ -1.52
SSR1P43307 AC005252.1-201ENST00000604518 1063 ntBASIC5.58□□□□□ -1.52
SSR1P43307 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SSR1P43307 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSR1P43307 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSR1P43307 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SSR1P43307 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.57□□□□□ -1.52
SSR1P43307 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSR1P43307 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSR1P43307 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
SSR1P43307 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSR1P43307 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SSR1P43307 RNU1-77P-201ENST00000390868 162 ntBASIC5.57□□□□□ -1.52
SSR1P43307 HSPD1P16-201ENST00000402302 394 ntBASIC5.57□□□□□ -1.52
SSR1P43307 GABARAPL3-201ENST00000412799 354 ntBASIC5.57□□□□□ -1.52
SSR1P43307 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.57□□□□□ -1.52
SSR1P43307 AC124944.2-201ENST00000429866 1242 ntBASIC5.57□□□□□ -1.52
SSR1P43307 AC012075.1-201ENST00000436549 580 ntBASIC5.57□□□□□ -1.52
SSR1P43307 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSR1P43307 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.57□□□□□ -1.52
SSR1P43307 RPSAP39-201ENST00000467439 883 ntBASIC5.57□□□□□ -1.52
SSR1P43307 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.57□□□□□ -1.52
SSR1P43307 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.57□□□□□ -1.52
SSR1P43307 AC022360.1-201ENST00000521058 340 ntBASIC5.57□□□□□ -1.52
SSR1P43307 HMGB1P40-201ENST00000525121 540 ntBASIC5.57□□□□□ -1.52
SSR1P43307 BLZF2P-201ENST00000553776 1130 ntBASIC5.57□□□□□ -1.52
SSR1P43307 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.57□□□□□ -1.52
SSR1P43307 PRPF19P1-201ENST00000584766 898 ntBASIC5.57□□□□□ -1.52
SSR1P43307 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.57□□□□□ -1.52
SSR1P43307 AC067931.1-201ENST00000624190 671 ntBASIC5.57□□□□□ -1.52
SSR1P43307 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSR1P43307 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSR1P43307 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSR1P43307 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SSR1P43307 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSR1P43307 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SSR1P43307 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.56□□□□□ -1.52
SSR1P43307 OR9K1P-201ENST00000326513 941 ntBASIC5.56□□□□□ -1.52
SSR1P43307 MIR133B-201ENST00000362210 119 ntBASIC5.56□□□□□ -1.52
SSR1P43307 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SSR1P43307 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.56□□□□□ -1.52
SSR1P43307 AL031985.1-201ENST00000392713 418 ntBASIC5.56□□□□□ -1.52
SSR1P43307 RN7SKP199-201ENST00000410325 305 ntBASIC5.56□□□□□ -1.52
SSR1P43307 RPL12P9-201ENST00000412942 488 ntBASIC5.56□□□□□ -1.52
SSR1P43307 PCNPP4-201ENST00000414817 517 ntBASIC5.56□□□□□ -1.52
SSR1P43307 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.56□□□□□ -1.52
SSR1P43307 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.56□□□□□ -1.52
SSR1P43307 AL389925.1-201ENST00000432257 728 ntBASIC5.56□□□□□ -1.52
SSR1P43307 NPM1P48-201ENST00000436002 853 ntBASIC5.56□□□□□ -1.52
SSR1P43307 RPS11P7-201ENST00000442125 465 ntBASIC5.56□□□□□ -1.52
SSR1P43307 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.56□□□□□ -1.52
SSR1P43307 RPL35AP19-201ENST00000469425 329 ntBASIC5.56□□□□□ -1.52
SSR1P43307 AC100832.1-201ENST00000471945 383 ntBASIC5.56□□□□□ -1.52
SSR1P43307 RPL7P40-201ENST00000481703 745 ntBASIC5.56□□□□□ -1.52
SSR1P43307 AL049874.2-201ENST00000492636 288 ntBASIC5.56□□□□□ -1.52
SSR1P43307 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.56□□□□□ -1.52
SSR1P43307 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms