Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC138409.2-202ENST00000507274 458 ntBASIC4.93□□□□□ -1.62
SOX3P41225 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SOX3P41225 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX3P41225 RNU6-760P-201ENST00000516078 97 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AC027308.1-201ENST00000517993 110 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
SOX3P41225 OR8K2P-201ENST00000524645 927 ntBASIC4.93□□□□□ -1.62
SOX3P41225 OR10D4P-201ENST00000525892 951 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AC024341.1-201ENST00000526444 1552 ntBASIC4.93□□□□□ -1.62
SOX3P41225 YWHABP2-201ENST00000540201 713 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AC040958.1-201ENST00000561102 201 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX3P41225 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.93□□□□□ -1.62
SOX3P41225 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.93□□□□□ -1.62
SOX3P41225 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX3P41225 AC073111.2-201ENST00000605657 1075 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX3P41225 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.93□□□□□ -1.62
SOX3P41225 MIR6719-201ENST00000622428 87 ntBASIC4.93□□□□□ -1.62
SOX3P41225 AP003400.6-201ENST00000624698 740 ntBASIC4.93□□□□□ -1.62
SOX3P41225 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.93□□□□□ -1.62
SOX3P41225 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX3P41225 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SOX3P41225 SAMMSON-227ENST00000642114 1199 ntBASIC4.93□□□□□ -1.62
SOX3P41225 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
SOX3P41225 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX3P41225 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.93□□□□□ -1.62
SOX3P41225 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX3P41225 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX3P41225 AC114947.2-201ENST00000565748 2125 ntBASIC4.93□□□□□ -1.62
SOX3P41225 MRRFP1-201ENST00000435941 1675 ntBASIC4.92□□□□□ -1.62
SOX3P41225 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX3P41225 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX3P41225 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX3P41225 AC004817.4-201ENST00000602396 3625 ntBASIC4.92□□□□□ -1.62
SOX3P41225 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SOX3P41225 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX3P41225 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX3P41225 RNU4-34P-201ENST00000410431 124 ntBASIC4.92□□□□□ -1.62
SOX3P41225 DPPA2P3-201ENST00000411853 655 ntBASIC4.92□□□□□ -1.62
SOX3P41225 COX5BP7-201ENST00000414780 274 ntBASIC4.92□□□□□ -1.62
SOX3P41225 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX3P41225 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX3P41225 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX3P41225 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX3P41225 AL627308.1-201ENST00000435693 821 ntBASIC4.92□□□□□ -1.62
SOX3P41225 TXNP2-201ENST00000443918 295 ntBASIC4.92□□□□□ -1.62
SOX3P41225 AC104634.1-201ENST00000452720 462 ntBASIC4.92□□□□□ -1.62
SOX3P41225 RPL7P6-201ENST00000480903 738 ntBASIC4.92□□□□□ -1.62
SOX3P41225 RN7SL727P-201ENST00000482164 296 ntBASIC4.92□□□□□ -1.62
SOX3P41225 AC058823.1-201ENST00000485315 474 ntBASIC4.92□□□□□ -1.62
SOX3P41225 IMPA1P1-201ENST00000510718 842 ntBASIC4.92□□□□□ -1.62
SOX3P41225 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX3P41225 SCARNA20.4-201ENST00000516969 131 ntBASIC4.92□□□□□ -1.62
SOX3P41225 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX3P41225 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.92□□□□□ -1.62
SOX3P41225 OR10G5P-201ENST00000532733 358 ntBASIC4.92□□□□□ -1.62
SOX3P41225 AC027369.5-201ENST00000533838 755 ntBASIC4.92□□□□□ -1.62
SOX3P41225 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX3P41225 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX3P41225 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX3P41225 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX3P41225 AC007448.1-201ENST00000582714 234 ntBASIC4.92□□□□□ -1.62
SOX3P41225 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX3P41225 OR51C1P-201ENST00000608504 942 ntBASIC4.92□□□□□ -1.62
SOX3P41225 uc_338.7-201ENST00000621834 124 ntBASIC4.92□□□□□ -1.62
SOX3P41225 AC103798.2-201ENST00000624292 632 ntBASIC4.92□□□□□ -1.62
SOX3P41225 AC106730.3-201ENST00000624568 641 ntBASIC4.92□□□□□ -1.62
SOX3P41225 AP000720.1-201ENST00000625091 483 ntBASIC4.92□□□□□ -1.62
SOX3P41225 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX3P41225 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX3P41225 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX3P41225 AC109780.1-201ENST00000451768 1344 ntBASIC4.92□□□□□ -1.62
SOX3P41225 NAMPTP1-201ENST00000440465 2514 ntBASIC4.91□□□□□ -1.62
SOX3P41225 AL731532.2-201ENST00000623542 1953 ntBASIC4.91□□□□□ -1.62
SOX3P41225 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SOX3P41225 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX3P41225 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX3P41225 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.91□□□□□ -1.62
SOX3P41225 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SOX3P41225 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX3P41225 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX3P41225 RNU1-43P-201ENST00000365052 165 ntBASIC4.91□□□□□ -1.62
SOX3P41225 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX3P41225 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SOX3P41225 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX3P41225 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.91□□□□□ -1.62
SOX3P41225 TRIM60P17-201ENST00000415181 719 ntBASIC4.91□□□□□ -1.62
SOX3P41225 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.91□□□□□ -1.62
SOX3P41225 AL121878.1-201ENST00000418638 859 ntBASIC4.91□□□□□ -1.62
SOX3P41225 SETP10-201ENST00000424368 814 ntBASIC4.91□□□□□ -1.62
SOX3P41225 AC093655.2-201ENST00000425735 631 ntBASIC4.91□□□□□ -1.62
SOX3P41225 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX3P41225 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.91□□□□□ -1.62
SOX3P41225 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.91□□□□□ -1.62
SOX3P41225 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms