Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.96□□□□□ -1.46
SCN4AP35499 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN4AP35499 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
SCN4AP35499 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN4AP35499 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN4AP35499 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
SCN4AP35499 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN4AP35499 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN4AP35499 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN4AP35499 RNA5SP397-201ENST00000391323 118 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AL445189.1-201ENST00000405722 338 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AF186996.5-201ENST00000418098 904 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 RPS29P9-201ENST00000440360 171 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AC000111.2-201ENST00000448200 210 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AC010618.1-201ENST00000469924 477 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AC116562.1-201ENST00000485355 781 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN4AP35499 AC098976.1-201ENST00000513014 541 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AC026688.1-201ENST00000520639 1168 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN4AP35499 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN4AP35499 AC023575.1-201ENST00000580510 358 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN4AP35499 BNIP3P35-201ENST00000604530 490 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AC034229.5-201ENST00000624258 185 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AC006210.2-201ENST00000367074 1545 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN4AP35499 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN4AP35499 AC140134.1-201ENST00000511830 3544 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN4AP35499 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN4AP35499 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN4AP35499 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCN4AP35499 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SCN4AP35499 AC093671.1-201ENST00000624981 2929 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN4AP35499 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN4AP35499 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SCN4AP35499 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
SCN4AP35499 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN4AP35499 AL732292.1-201ENST00000426692 226 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN4AP35499 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN4AP35499 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN4AP35499 AC104971.1-201ENST00000495117 578 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 RNU2-30P-201ENST00000516209 141 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN4AP35499 AC019322.1-201ENST00000571869 389 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.95□□□□□ -1.46
SCN4AP35499 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN4AP35499 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN4AP35499 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AC002044.3-201ENST00000623314 541 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 AC008785.1-201ENST00000624475 456 ntBASIC5.95□□□□□ -1.46
SCN4AP35499 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.95□□□□□ -1.46
SCN4AP35499 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCN4AP35499 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCN4AP35499 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCN4AP35499 ZNF402P-201ENST00000404435 3100 ntBASIC5.94□□□□□ -1.46
SCN4AP35499 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.94□□□□□ -1.46
SCN4AP35499 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN4AP35499 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN4AP35499 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN4AP35499 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.94□□□□□ -1.46
SCN4AP35499 OR4K17-201ENST00000315543 1032 ntBASIC5.94□□□□□ -1.46
SCN4AP35499 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN4AP35499 RNU1-13P-201ENST00000384499 162 ntBASIC5.94□□□□□ -1.46
SCN4AP35499 HYALP1-201ENST00000417674 1279 ntBASIC5.94□□□□□ -1.46
SCN4AP35499 BMS1P19-201ENST00000433925 393 ntBASIC5.94□□□□□ -1.46
SCN4AP35499 AC099670.2-201ENST00000435130 321 ntBASIC5.94□□□□□ -1.46
SCN4AP35499 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.94□□□□□ -1.46
SCN4AP35499 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCN4AP35499 RPS5P7-201ENST00000456664 608 ntBASIC5.94□□□□□ -1.46
SCN4AP35499 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.94□□□□□ -1.46
SCN4AP35499 AC093827.1-201ENST00000480094 861 ntBASIC5.94□□□□□ -1.46
SCN4AP35499 RNA5SP143-201ENST00000516936 115 ntBASIC5.94□□□□□ -1.46
SCN4AP35499 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.94□□□□□ -1.46
SCN4AP35499 OR8B1P-202ENST00000641132 1178 ntBASIC5.94□□□□□ -1.46
SCN4AP35499 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN4AP35499 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN4AP35499 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN4AP35499 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SCN4AP35499 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCN4AP35499 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN4AP35499 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.94□□□□□ -1.46
SCN4AP35499 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SCN4AP35499 AP000473.2-201ENST00000602659 1537 ntBASIC5.93□□□□□ -1.46
SCN4AP35499 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SCN4AP35499 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCN4AP35499 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCN4AP35499 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCN4AP35499 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN4AP35499 LINC01881-201ENST00000416103 412 ntBASIC5.93□□□□□ -1.46
SCN4AP35499 AC006065.1-201ENST00000422539 802 ntBASIC5.93□□□□□ -1.46
SCN4AP35499 MTND2P28-201ENST00000457540 1044 ntBASIC5.93□□□□□ -1.46
SCN4AP35499 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.93□□□□□ -1.46
SCN4AP35499 PSAT1P4-201ENST00000466500 526 ntBASIC5.93□□□□□ -1.46
SCN4AP35499 AC091167.1-201ENST00000492017 396 ntBASIC5.93□□□□□ -1.46
SCN4AP35499 AC020593.1-201ENST00000507399 299 ntBASIC5.93□□□□□ -1.46
SCN4AP35499 MED28P5-201ENST00000528254 438 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms