Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC13P31276 TAAR4P-201ENST00000454843 1039 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC13P31276 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC13P31276 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC13P31276 RNU6-941P-201ENST00000516346 108 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC13P31276 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 NPM1P35-201ENST00000533043 868 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
HOXC13P31276 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXC13P31276 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.65□□□□□ -1.5
HOXC13P31276 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC13P31276 BMS1P7-201ENST00000602440 1052 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC13P31276 AL121612.2-201ENST00000612261 482 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC13P31276 MIR6133-201ENST00000617057 108 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC13P31276 AP003400.6-201ENST00000624698 740 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC13P31276 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC13P31276 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC13P31276 AC009229.4-201ENST00000623854 1947 ntBASIC5.65□□□□□ -1.51
HOXC13P31276 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC13P31276 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC13P31276 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC13P31276 AP000756.2-201ENST00000624168 2567 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HOXC13P31276 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC13P31276 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HOXC13P31276 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC13P31276 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC13P31276 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC13P31276 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC13P31276 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC13P31276 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
HOXC13P31276 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXC13P31276 MIR133B-201ENST00000362210 119 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 RNA5SP453-201ENST00000362503 119 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 MT-TP-201ENST00000387461 68 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXC13P31276 AL512430.2-201ENST00000406786 339 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 RPS20P25-201ENST00000412447 352 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC13P31276 RPL26P29-201ENST00000415623 438 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 AL354868.1-201ENST00000417077 482 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC13P31276 RPL12P17-201ENST00000432393 498 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 AL353597.2-202ENST00000434901 373 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 MTCYBP29-201ENST00000436327 1006 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC13P31276 PSAT1P4-201ENST00000466500 526 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC13P31276 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.64□□□□□ -1.51
HOXC13P31276 AC111000.6-201ENST00000514471 709 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 SNORA48.9-201ENST00000516419 162 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 RN7SKP66-201ENST00000516681 231 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HOXC13P31276 OR7E10P-201ENST00000526420 991 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXC13P31276 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.64□□□□□ -1.51
HOXC13P31276 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC13P31276 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC13P31276 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC13P31276 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC13P31276 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC13P31276 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC13P31276 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC13P31276 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC13P31276 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC13P31276 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC13P31276 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC13P31276 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HOXC13P31276 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC13P31276 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC13P31276 AC100757.1-201ENST00000616872 1835 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC13P31276 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
HOXC13P31276 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXC13P31276 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC13P31276 PHKBP1-201ENST00000450951 1951 ntBASIC5.64□□□□□ -1.51
HOXC13P31276 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC13P31276 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HOXC13P31276 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC13P31276 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC13P31276 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
HOXC13P31276 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC13P31276 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC13P31276 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HOXC13P31276 AC005294.1-201ENST00000355509 281 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 RN7SKP103-201ENST00000363848 320 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 U3.28-201ENST00000391249 210 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 DBIP1-201ENST00000401435 260 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 AL133270.1-201ENST00000402635 279 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 DUTP5-201ENST00000406790 469 ntBASIC5.63□□□□□ -1.51
HOXC13P31276 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXC13P31276 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC13P31276 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms