Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 MYL12BP1-201ENST00000569826 507 ntBASIC8.58□□□□□ -1.04
PTPREP23469 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PTPREP23469 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.58□□□□□ -1.04
PTPREP23469 COX6CP16-201ENST00000603667 216 ntBASIC8.58□□□□□ -1.04
PTPREP23469 Z84480.1-201ENST00000605131 311 ntBASIC8.58□□□□□ -1.04
PTPREP23469 AC093635.1-201ENST00000609028 555 ntBASIC8.58□□□□□ -1.04
PTPREP23469 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC8.58□□□□□ -1.04
PTPREP23469 SNORD91A-202ENST00000609620 191 ntBASIC8.58□□□□□ -1.04
PTPREP23469 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC8.58□□□□□ -1.04
PTPREP23469 AC234782.5-201ENST00000617723 324 ntBASIC8.58□□□□□ -1.04
PTPREP23469 MIR6813-201ENST00000621638 56 ntBASIC8.58□□□□□ -1.04
PTPREP23469 AP006248.2-201ENST00000623309 592 ntBASIC8.58□□□□□ -1.04
PTPREP23469 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC8.58□□□□□ -1.04
PTPREP23469 AL161891.1-201ENST00000621575 4636 ntBASIC8.58□□□□□ -1.04
PTPREP23469 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC8.58□□□□□ -1.04
PTPREP23469 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PTPREP23469 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PTPREP23469 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
PTPREP23469 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PTPREP23469 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PTPREP23469 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTPREP23469 AL512353.3-201ENST00000417517 1326 ntBASIC8.57□□□□□ -1.04
PTPREP23469 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTPREP23469 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PTPREP23469 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.57□□□□□ -1.04
PTPREP23469 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
PTPREP23469 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PTPREP23469 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PTPREP23469 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTPREP23469 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.57□□□□□ -1.04
PTPREP23469 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC8.57□□□□□ -1.04
PTPREP23469 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTPREP23469 NSRP1P1-201ENST00000444067 1693 ntBASIC8.57□□□□□ -1.04
PTPREP23469 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
PTPREP23469 AL157777.2-201ENST00000258070 137 ntBASIC8.57□□□□□ -1.04
PTPREP23469 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC8.57□□□□□ -1.04
PTPREP23469 RPS3AP5-201ENST00000389400 821 ntBASIC8.57□□□□□ -1.04
PTPREP23469 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC8.57□□□□□ -1.04
PTPREP23469 Y_RNA.608-201ENST00000410647 95 ntBASIC8.57□□□□□ -1.04
PTPREP23469 RNU6-1148P-201ENST00000410992 104 ntBASIC8.57□□□□□ -1.04
PTPREP23469 AC005033.1-201ENST00000428904 813 ntBASIC8.57□□□□□ -1.04
PTPREP23469 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.57□□□□□ -1.04
PTPREP23469 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC8.57□□□□□ -1.04
PTPREP23469 AL604028.2-201ENST00000437848 788 ntBASIC8.57□□□□□ -1.04
PTPREP23469 DBIL5P2-201ENST00000443827 253 ntBASIC8.57□□□□□ -1.04
PTPREP23469 CALM1P2-201ENST00000452941 448 ntBASIC8.57□□□□□ -1.04
PTPREP23469 MTATP8P1-201ENST00000467115 207 ntBASIC8.57□□□□□ -1.04
PTPREP23469 RN7SL259P-201ENST00000478499 253 ntBASIC8.57□□□□□ -1.04
PTPREP23469 RPS3AP50-201ENST00000487064 803 ntBASIC8.57□□□□□ -1.04
PTPREP23469 HMGB1P30-201ENST00000492455 606 ntBASIC8.57□□□□□ -1.04
PTPREP23469 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC8.57□□□□□ -1.04
PTPREP23469 Y_RNA.718-201ENST00000517110 102 ntBASIC8.57□□□□□ -1.04
PTPREP23469 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC8.57□□□□□ -1.04
PTPREP23469 AC107952.1-201ENST00000524200 376 ntBASIC8.57□□□□□ -1.04
PTPREP23469 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8.57□□□□□ -1.04
PTPREP23469 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC8.57□□□□□ -1.04
PTPREP23469 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC8.57□□□□□ -1.04
PTPREP23469 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC8.57□□□□□ -1.04
PTPREP23469 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTPREP23469 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC8.57□□□□□ -1.04
PTPREP23469 AC112187.2-201ENST00000604345 283 ntBASIC8.57□□□□□ -1.04
PTPREP23469 AC005014.2-201ENST00000607795 599 ntBASIC8.57□□□□□ -1.04
PTPREP23469 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8.57□□□□□ -1.04
PTPREP23469 AP004607.9-201ENST00000618202 316 ntBASIC8.57□□□□□ -1.04
PTPREP23469 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.57□□□□□ -1.04
PTPREP23469 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
PTPREP23469 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTPREP23469 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PTPREP23469 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTPREP23469 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PTPREP23469 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
PTPREP23469 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
PTPREP23469 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTPREP23469 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
PTPREP23469 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PTPREP23469 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PTPREP23469 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PTPREP23469 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTPREP23469 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTPREP23469 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PTPREP23469 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
PTPREP23469 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.56□□□□□ -1.04
PTPREP23469 COL6A4P1-202ENST00000487147 4317 ntBASIC8.56□□□□□ -1.04
PTPREP23469 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
PTPREP23469 AL078621.1-201ENST00000272567 768 ntBASIC8.56□□□□□ -1.04
PTPREP23469 Y_RNA.307-201ENST00000365022 117 ntBASIC8.56□□□□□ -1.04
PTPREP23469 RNU6-282P-201ENST00000365357 103 ntBASIC8.56□□□□□ -1.04
PTPREP23469 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC8.56□□□□□ -1.04
PTPREP23469 SNORD116-29-201ENST00000384516 83 ntBASIC8.56□□□□□ -1.04
PTPREP23469 MIR575-201ENST00000385013 94 ntBASIC8.56□□□□□ -1.04
PTPREP23469 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
PTPREP23469 VIM2P-201ENST00000402383 1294 ntBASIC8.56□□□□□ -1.04
PTPREP23469 SPA17P1-201ENST00000416656 452 ntBASIC8.56□□□□□ -1.04
PTPREP23469 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.56□□□□□ -1.04
PTPREP23469 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC8.56□□□□□ -1.04
PTPREP23469 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC8.56□□□□□ -1.04
PTPREP23469 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.56□□□□□ -1.04
PTPREP23469 YRDCP3-201ENST00000456507 480 ntBASIC8.56□□□□□ -1.04
PTPREP23469 AC112206.1-201ENST00000468416 477 ntBASIC8.56□□□□□ -1.04
PTPREP23469 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms