Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL031577.2-201ENST00000404133 280 ntBASIC7.23□□□□□ -1.25
LIG1P18858 RN7SKP221-201ENST00000410420 301 ntBASIC7.23□□□□□ -1.25
LIG1P18858 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LIG1P18858 DPRXP1-201ENST00000426312 460 ntBASIC7.23□□□□□ -1.25
LIG1P18858 MOB1AP1-201ENST00000430903 535 ntBASIC7.23□□□□□ -1.25
LIG1P18858 AC005189.1-201ENST00000431286 310 ntBASIC7.23□□□□□ -1.25
LIG1P18858 FTLP19-201ENST00000433300 394 ntBASIC7.23□□□□□ -1.25
LIG1P18858 AL354941.1-201ENST00000438600 464 ntBASIC7.23□□□□□ -1.25
LIG1P18858 COL11A2P1-205ENST00000441798 676 ntBASIC7.23□□□□□ -1.25
LIG1P18858 MTCO1P19-201ENST00000443487 500 ntBASIC7.23□□□□□ -1.25
LIG1P18858 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.23□□□□□ -1.25
LIG1P18858 AP000936.2-201ENST00000447151 681 ntBASIC7.23□□□□□ -1.25
LIG1P18858 OR52E3P-201ENST00000452083 936 ntBASIC7.23□□□□□ -1.25
LIG1P18858 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG1P18858 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG1P18858 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG1P18858 AC131392.1-201ENST00000506490 633 ntBASIC7.23□□□□□ -1.25
LIG1P18858 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC7.23□□□□□ -1.25
LIG1P18858 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG1P18858 AC021146.7-201ENST00000509604 775 ntBASIC7.23□□□□□ -1.25
LIG1P18858 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC7.23□□□□□ -1.25
LIG1P18858 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.23□□□□□ -1.25
LIG1P18858 NDUFA5P2-201ENST00000519723 344 ntBASIC7.23□□□□□ -1.25
LIG1P18858 AP001000.1-201ENST00000526843 742 ntBASIC7.23□□□□□ -1.25
LIG1P18858 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG1P18858 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.23□□□□□ -1.25
LIG1P18858 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG1P18858 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG1P18858 OR11H3P-201ENST00000554547 982 ntBASIC7.23□□□□□ -1.25
LIG1P18858 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.23□□□□□ -1.25
LIG1P18858 HNRNPCP1-201ENST00000556181 766 ntBASIC7.23□□□□□ -1.25
LIG1P18858 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG1P18858 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.23□□□□□ -1.25
LIG1P18858 MTCO3P24-201ENST00000572729 782 ntBASIC7.23□□□□□ -1.25
LIG1P18858 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.23□□□□□ -1.25
LIG1P18858 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.23□□□□□ -1.25
LIG1P18858 AC114477.1-201ENST00000605097 605 ntBASIC7.23□□□□□ -1.25
LIG1P18858 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.23□□□□□ -1.25
LIG1P18858 OR2BH1P-201ENST00000608850 864 ntBASIC7.23□□□□□ -1.25
LIG1P18858 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LIG1P18858 MIR7854-201ENST00000620068 65 ntBASIC7.23□□□□□ -1.25
LIG1P18858 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
LIG1P18858 AL356266.1-201ENST00000623311 483 ntBASIC7.23□□□□□ -1.25
LIG1P18858 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.23□□□□□ -1.25
LIG1P18858 ZNF663P-202ENST00000641770 1131 ntBASIC7.23□□□□□ -1.25
LIG1P18858 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG1P18858 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LIG1P18858 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
LIG1P18858 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
LIG1P18858 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.23□□□□□ -1.25
LIG1P18858 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LIG1P18858 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
LIG1P18858 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
LIG1P18858 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.23□□□□□ -1.25
LIG1P18858 AC079298.1-201ENST00000625026 1619 ntBASIC7.23□□□□□ -1.25
LIG1P18858 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG1P18858 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
LIG1P18858 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LIG1P18858 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.22□□□□□ -1.25
LIG1P18858 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
LIG1P18858 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LIG1P18858 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
LIG1P18858 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
LIG1P18858 RN7SKP129-201ENST00000410288 299 ntBASIC7.22□□□□□ -1.25
LIG1P18858 RN7SKP281-201ENST00000410472 352 ntBASIC7.22□□□□□ -1.25
LIG1P18858 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC7.22□□□□□ -1.25
LIG1P18858 NPM1P11-201ENST00000417106 855 ntBASIC7.22□□□□□ -1.25
LIG1P18858 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.22□□□□□ -1.25
LIG1P18858 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC7.22□□□□□ -1.25
LIG1P18858 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC7.22□□□□□ -1.25
LIG1P18858 GTF2IP7-202ENST00000436677 309 ntBASIC7.22□□□□□ -1.25
LIG1P18858 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.22□□□□□ -1.25
LIG1P18858 MTCYBP34-201ENST00000439552 670 ntBASIC7.22□□□□□ -1.25
LIG1P18858 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.22□□□□□ -1.25
LIG1P18858 SUN3-208ENST00000453192 801 ntTSL 5 BASIC7.22□□□□□ -1.25
LIG1P18858 RPL7L1P3-201ENST00000455249 689 ntBASIC7.22□□□□□ -1.25
LIG1P18858 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC7.22□□□□□ -1.25
LIG1P18858 ARL4AP1-201ENST00000503220 705 ntBASIC7.22□□□□□ -1.25
LIG1P18858 AC113347.3-201ENST00000509113 148 ntBASIC7.22□□□□□ -1.25
LIG1P18858 SEPT10P1-201ENST00000517342 1162 ntBASIC7.22□□□□□ -1.25
LIG1P18858 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.22□□□□□ -1.25
LIG1P18858 COX6B1P4-201ENST00000519826 484 ntBASIC7.22□□□□□ -1.25
LIG1P18858 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC7.22□□□□□ -1.25
LIG1P18858 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LIG1P18858 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.22□□□□□ -1.25
LIG1P18858 AP002963.1-201ENST00000530590 184 ntBASIC7.22□□□□□ -1.25
LIG1P18858 AC244502.2-201ENST00000543361 851 ntBASIC7.22□□□□□ -1.25
LIG1P18858 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC7.22□□□□□ -1.25
LIG1P18858 AC009120.3-201ENST00000563335 499 ntBASIC7.22□□□□□ -1.25
LIG1P18858 AL512347.1-201ENST00000566420 503 ntBASIC7.22□□□□□ -1.25
LIG1P18858 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LIG1P18858 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LIG1P18858 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC7.22□□□□□ -1.25
LIG1P18858 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.22□□□□□ -1.25
LIG1P18858 MIR6780B-201ENST00000610307 79 ntBASIC7.22□□□□□ -1.25
LIG1P18858 AL359757.1-201ENST00000623176 255 ntBASIC7.22□□□□□ -1.25
LIG1P18858 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LIG1P18858 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.22□□□□□ -1.25
LIG1P18858 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LIG1P18858 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms