Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.16□□□□□ -1.42
COL6A2P12110 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.16□□□□□ -1.42
COL6A2P12110 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
COL6A2P12110 AC104689.1-201ENST00000473356 768 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AC091959.2-201ENST00000477363 321 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 RPL23AP37-201ENST00000479658 549 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.16□□□□□ -1.42
COL6A2P12110 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.16□□□□□ -1.42
COL6A2P12110 AC026782.2-201ENST00000510845 636 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AC105185.1-201ENST00000518705 535 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL6A2P12110 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.16□□□□□ -1.42
COL6A2P12110 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
COL6A2P12110 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC6.16□□□□□ -1.42
COL6A2P12110 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.16□□□□□ -1.42
COL6A2P12110 CASC16-202ENST00000563844 610 ntTSL 3 BASIC6.16□□□□□ -1.42
COL6A2P12110 AC020916.2-201ENST00000591242 360 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AL360012.1-201ENST00000602813 131 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AC073114.1-201ENST00000612027 490 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 STMN1P1-201ENST00000617809 440 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 AC069234.4-201ENST00000621276 412 ntBASIC6.16□□□□□ -1.42
COL6A2P12110 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL6A2P12110 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.16□□□□□ -1.42
COL6A2P12110 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
COL6A2P12110 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.16□□□□□ -1.42
COL6A2P12110 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.16□□□□□ -1.42
COL6A2P12110 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL6A2P12110 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
COL6A2P12110 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL6A2P12110 MTND5P29-201ENST00000458676 1807 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC093671.1-201ENST00000624981 2929 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL6A2P12110 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
COL6A2P12110 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL6A2P12110 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
COL6A2P12110 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL6A2P12110 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
COL6A2P12110 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
COL6A2P12110 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL6A2P12110 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL6A2P12110 ZNF733P-202ENST00000444809 1573 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
COL6A2P12110 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL6A2P12110 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL6A2P12110 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
COL6A2P12110 CR381670.1-201ENST00000624291 1693 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL6A2P12110 AL121768.1-201ENST00000613917 2544 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL6A2P12110 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
COL6A2P12110 RN7SKP184-201ENST00000362348 333 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.15□□□□□ -1.42
COL6A2P12110 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.15□□□□□ -1.42
COL6A2P12110 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
COL6A2P12110 RPS27AP11-201ENST00000402798 447 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 RNU6-757P-201ENST00000410334 100 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC013404.1-201ENST00000413068 249 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 TCEA1P4-201ENST00000415066 844 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 MTCO1P21-201ENST00000416634 589 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 RPL21P50-201ENST00000417698 477 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 MRPS21P2-201ENST00000424704 264 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.15□□□□□ -1.42
COL6A2P12110 OR5BE1P-201ENST00000425977 939 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC6.15□□□□□ -1.42
COL6A2P12110 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.15□□□□□ -1.42
COL6A2P12110 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.15□□□□□ -1.42
COL6A2P12110 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.15□□□□□ -1.42
COL6A2P12110 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.15□□□□□ -1.42
COL6A2P12110 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.15□□□□□ -1.42
COL6A2P12110 RPL23AP60-201ENST00000450011 454 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.15□□□□□ -1.42
COL6A2P12110 AC084754.1-201ENST00000463466 464 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 RN7SL369P-201ENST00000477138 299 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 RN7SL413P-201ENST00000482700 297 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 PRELID3BP7-201ENST00000503606 469 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.15□□□□□ -1.42
COL6A2P12110 KHDC1P1-201ENST00000511053 508 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC116353.3-201ENST00000511215 249 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC6.15□□□□□ -1.42
COL6A2P12110 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.15□□□□□ -1.42
COL6A2P12110 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.15□□□□□ -1.42
COL6A2P12110 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.15□□□□□ -1.42
COL6A2P12110 AC124293.1-201ENST00000530034 493 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC6.15□□□□□ -1.42
COL6A2P12110 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.15□□□□□ -1.42
COL6A2P12110 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.15□□□□□ -1.42
COL6A2P12110 AC008055.1-201ENST00000547032 609 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.15□□□□□ -1.42
COL6A2P12110 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL6A2P12110 AC068305.2-201ENST00000550567 1205 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 HMGN1P26-201ENST00000558737 303 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC027796.1-201ENST00000575593 512 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC008759.1-201ENST00000589783 983 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.15□□□□□ -1.42
COL6A2P12110 BNIP3P26-201ENST00000600827 554 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC125494.3-201ENST00000602759 455 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC095055.1-201ENST00000603472 1113 ntBASIC6.15□□□□□ -1.42
COL6A2P12110 AC107304.1-201ENST00000604229 296 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms