Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TOP1P11387 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.98□□□□□ -1.45
TOP1P11387 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TOP1P11387 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TOP1P11387 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.98□□□□□ -1.45
TOP1P11387 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.98□□□□□ -1.45
TOP1P11387 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TOP1P11387 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TOP1P11387 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.98□□□□□ -1.45
TOP1P11387 RN7SKP113-201ENST00000363891 295 ntBASIC5.98□□□□□ -1.45
TOP1P11387 RNA5SP455-201ENST00000365190 119 ntBASIC5.98□□□□□ -1.45
TOP1P11387 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TOP1P11387 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TOP1P11387 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TOP1P11387 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TOP1P11387 AL109941.1-201ENST00000401925 229 ntBASIC5.98□□□□□ -1.45
TOP1P11387 RN7SKP125-201ENST00000410481 302 ntBASIC5.98□□□□□ -1.45
TOP1P11387 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.98□□□□□ -1.45
TOP1P11387 AL034379.1-201ENST00000423216 253 ntBASIC5.98□□□□□ -1.45
TOP1P11387 RBMY2QP-201ENST00000429799 1147 ntBASIC5.98□□□□□ -1.45
TOP1P11387 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.98□□□□□ -1.45
TOP1P11387 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.98□□□□□ -1.45
TOP1P11387 VN1R54P-201ENST00000435210 1049 ntBASIC5.98□□□□□ -1.45
TOP1P11387 RHOT1P3-201ENST00000436571 331 ntBASIC5.98□□□□□ -1.45
TOP1P11387 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.98□□□□□ -1.45
TOP1P11387 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.98□□□□□ -1.45
TOP1P11387 RPL34P20-201ENST00000442771 351 ntBASIC5.98□□□□□ -1.45
TOP1P11387 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.98□□□□□ -1.45
TOP1P11387 OTX2P1-201ENST00000450956 354 ntBASIC5.98□□□□□ -1.45
TOP1P11387 RN7SL443P-201ENST00000464331 290 ntBASIC5.98□□□□□ -1.45
TOP1P11387 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.98□□□□□ -1.45
TOP1P11387 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.98□□□□□ -1.45
TOP1P11387 AP000676.2-201ENST00000529711 301 ntBASIC5.98□□□□□ -1.45
TOP1P11387 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.98□□□□□ -1.45
TOP1P11387 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.98□□□□□ -1.45
TOP1P11387 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.98□□□□□ -1.45
TOP1P11387 MIR4691-201ENST00000583764 85 ntBASIC5.98□□□□□ -1.45
TOP1P11387 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.98□□□□□ -1.45
TOP1P11387 AL451049.1-201ENST00000608672 497 ntBASIC5.98□□□□□ -1.45
TOP1P11387 EIF3FP1-201ENST00000613970 806 ntBASIC5.98□□□□□ -1.45
TOP1P11387 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.98□□□□□ -1.45
TOP1P11387 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TOP1P11387 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TOP1P11387 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.98□□□□□ -1.45
TOP1P11387 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TOP1P11387 AL450345.1-202ENST00000605741 3881 ntBASIC5.98□□□□□ -1.45
TOP1P11387 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TOP1P11387 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
TOP1P11387 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TOP1P11387 AL929601.4-201ENST00000613011 1341 ntBASIC5.98□□□□□ -1.45
TOP1P11387 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TOP1P11387 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
TOP1P11387 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOP1P11387 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOP1P11387 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TOP1P11387 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
TOP1P11387 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TOP1P11387 CASC19-221ENST00000641309 1382 ntBASIC5.97□□□□□ -1.45
TOP1P11387 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TOP1P11387 AC112255.1-201ENST00000624070 2493 ntBASIC5.97□□□□□ -1.45
TOP1P11387 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TOP1P11387 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TOP1P11387 NPM1P48-201ENST00000436002 853 ntBASIC5.97□□□□□ -1.45
TOP1P11387 RPL12P3-201ENST00000440080 396 ntBASIC5.97□□□□□ -1.45
TOP1P11387 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.97□□□□□ -1.45
TOP1P11387 AC021660.1-201ENST00000465006 554 ntBASIC5.97□□□□□ -1.45
TOP1P11387 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.97□□□□□ -1.45
TOP1P11387 OR2A3P-201ENST00000493774 953 ntBASIC5.97□□□□□ -1.45
TOP1P11387 RPL37AP8-201ENST00000494116 276 ntBASIC5.97□□□□□ -1.45
TOP1P11387 COX6B1P5-201ENST00000509843 249 ntBASIC5.97□□□□□ -1.45
TOP1P11387 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.97□□□□□ -1.45
TOP1P11387 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.97□□□□□ -1.45
TOP1P11387 OR7E128P-201ENST00000532736 1024 ntBASIC5.97□□□□□ -1.45
TOP1P11387 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.97□□□□□ -1.45
TOP1P11387 AF117829.2-201ENST00000619538 361 ntBASIC5.97□□□□□ -1.45
TOP1P11387 MIR6730-201ENST00000622213 67 ntBASIC5.97□□□□□ -1.45
TOP1P11387 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TOP1P11387 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TOP1P11387 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TOP1P11387 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.97□□□□□ -1.45
TOP1P11387 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TOP1P11387 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TOP1P11387 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOP1P11387 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TOP1P11387 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.97□□□□□ -1.45
TOP1P11387 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.97□□□□□ -1.45
TOP1P11387 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOP1P11387 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TOP1P11387 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOP1P11387 AC131971.1-201ENST00000332881 1482 ntBASIC5.96□□□□□ -1.45
TOP1P11387 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TOP1P11387 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.96□□□□□ -1.45
TOP1P11387 MUC2-202ENST00000613187 4845 ntBASIC5.96□□□□□ -1.45
TOP1P11387 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
TOP1P11387 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
TOP1P11387 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
TOP1P11387 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.96□□□□□ -1.46
TOP1P11387 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOP1P11387 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.96□□□□□ -1.46
TOP1P11387 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms