Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC2.97□□□□□ -1.93
APOBP04114 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 MAPK6PS2-201ENST00000379571 2060 ntBASIC2.97□□□□□ -1.93
APOBP04114 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 AC006058.1-201ENST00000568686 5067 ntBASIC2.97□□□□□ -1.93
APOBP04114 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
APOBP04114 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
APOBP04114 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC2.97□□□□□ -1.93
APOBP04114 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC2.97□□□□□ -1.93
APOBP04114 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC2.97□□□□□ -1.93
APOBP04114 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.97□□□□□ -1.93
APOBP04114 AC015795.1-201ENST00000513669 327 ntBASIC2.97□□□□□ -1.93
APOBP04114 SOD1P3-201ENST00000518682 454 ntBASIC2.97□□□□□ -1.93
APOBP04114 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC2.97□□□□□ -1.93
APOBP04114 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.97□□□□□ -1.93
APOBP04114 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC2.97□□□□□ -1.93
APOBP04114 AC018816.2-201ENST00000621460 353 ntBASIC2.97□□□□□ -1.93
APOBP04114 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOBP04114 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC2.96□□□□□ -1.93
APOBP04114 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
APOBP04114 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC2.96□□□□□ -1.93
APOBP04114 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC2.96□□□□□ -1.93
APOBP04114 AC007998.4-201ENST00000612496 2533 ntBASIC2.96□□□□□ -1.94
APOBP04114 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
APOBP04114 AC114814.2-201ENST00000419195 485 ntBASIC2.96□□□□□ -1.94
APOBP04114 MTND2P40-201ENST00000436718 841 ntBASIC2.96□□□□□ -1.94
APOBP04114 RN7SL691P-201ENST00000494487 301 ntBASIC2.96□□□□□ -1.94
APOBP04114 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC2.96□□□□□ -1.94
APOBP04114 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
APOBP04114 AL133243.1-201ENST00000614487 366 ntBASIC2.96□□□□□ -1.94
APOBP04114 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC2.96□□□□□ -1.94
APOBP04114 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC2.96□□□□□ -1.94
APOBP04114 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC2.96□□□□□ -1.94
APOBP04114 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC2.96□□□□□ -1.94
APOBP04114 NOL8P1-201ENST00000508336 3529 ntBASIC2.96□□□□□ -1.94
APOBP04114 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC2.96□□□□□ -1.94
APOBP04114 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 SOCS5P3-201ENST00000425115 1576 ntBASIC2.96□□□□□ -1.94
APOBP04114 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC2.96□□□□□ -1.94
APOBP04114 AL390316.1-201ENST00000406279 553 ntBASIC2.96□□□□□ -1.94
APOBP04114 RN7SKP202-201ENST00000410439 330 ntBASIC2.96□□□□□ -1.94
APOBP04114 AC017019.1-201ENST00000426129 261 ntBASIC2.96□□□□□ -1.94
APOBP04114 PRPF38AP1-201ENST00000451976 933 ntBASIC2.96□□□□□ -1.94
APOBP04114 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC2.96□□□□□ -1.94
APOBP04114 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC2.96□□□□□ -1.94
APOBP04114 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC2.96□□□□□ -1.94
APOBP04114 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC2.96□□□□□ -1.94
APOBP04114 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC2.96□□□□□ -1.94
APOBP04114 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC2.96□□□□□ -1.94
APOBP04114 AC017100.2-201ENST00000584628 355 ntBASIC2.96□□□□□ -1.94
APOBP04114 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
APOBP04114 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC2.96□□□□□ -1.94
APOBP04114 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC2.96□□□□□ -1.94
APOBP04114 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
APOBP04114 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
APOBP04114 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 AL355488.2-201ENST00000609909 2850 ntBASIC2.96□□□□□ -1.94
APOBP04114 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC2.96□□□□□ -1.94
APOBP04114 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 AC119751.5-201ENST00000514077 770 ntBASIC2.96□□□□□ -1.94
APOBP04114 MTCO1P35-201ENST00000515270 228 ntBASIC2.96□□□□□ -1.94
APOBP04114 RN7SKP67-201ENST00000515905 235 ntBASIC2.96□□□□□ -1.94
APOBP04114 AC027807.1-201ENST00000559921 996 ntBASIC2.96□□□□□ -1.94
APOBP04114 NDUFB4P11-201ENST00000560510 395 ntBASIC2.96□□□□□ -1.94
APOBP04114 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC2.96□□□□□ -1.94
APOBP04114 OR2BH1P-201ENST00000608850 864 ntBASIC2.96□□□□□ -1.94
APOBP04114 FTO-203ENST00000460382 1517 ntTSL 5 BASIC2.96□□□□□ -1.94
APOBP04114 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOBP04114 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
APOBP04114 AC079777.1-201ENST00000623836 1953 ntBASIC2.96□□□□□ -1.94
APOBP04114 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
APOBP04114 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
APOBP04114 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC2.95□□□□□ -1.94
APOBP04114 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
APOBP04114 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
APOBP04114 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC2.95□□□□□ -1.94
APOBP04114 ACTR3P2-201ENST00000439585 1257 ntBASIC2.95□□□□□ -1.94
APOBP04114 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms