Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFBP01127 AC091046.3-201ENST00000631455 1574 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.35□□□□□ -1.55
PDGFBP01127 U3.3-201ENST00000362986 216 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 RNU1-146P-201ENST00000364015 165 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 MT-RNR1-201ENST00000389680 954 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 RPL10P10-201ENST00000403509 664 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFBP01127 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFBP01127 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.35□□□□□ -1.55
PDGFBP01127 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 OR52J1P-201ENST00000450596 932 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFBP01127 AC092754.1-201ENST00000472975 479 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PDGFBP01127 AC105918.1-201ENST00000474399 838 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 AP000797.2-201ENST00000475768 606 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 AC111000.3-201ENST00000508057 576 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 AC093824.1-201ENST00000508796 343 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 SNORA70.11-201ENST00000515987 138 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 SNORA70.13-201ENST00000516116 138 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.35□□□□□ -1.55
PDGFBP01127 AC009643.1-201ENST00000532030 391 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFBP01127 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFBP01127 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFBP01127 MIR3667-201ENST00000581025 74 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 H3F3BP2-201ENST00000583907 357 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 BNIP3P22-201ENST00000593399 556 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFBP01127 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFBP01127 HIRAP1-201ENST00000605318 787 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 AC006338.2-201ENST00000616864 791 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 AL590410.1-201ENST00000617925 333 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PDGFBP01127 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PDGFBP01127 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFBP01127 AP001153.1-201ENST00000641024 338 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFBP01127 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFBP01127 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFBP01127 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFBP01127 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFBP01127 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFBP01127 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFBP01127 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFBP01127 CASC19-260ENST00000641828 2001 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.35□□□□□ -1.55
PDGFBP01127 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFBP01127 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFBP01127 AC093775.1-201ENST00000624154 1868 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PDGFBP01127 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFBP01127 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PDGFBP01127 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PDGFBP01127 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PDGFBP01127 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PDGFBP01127 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFBP01127 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFBP01127 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFBP01127 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PDGFBP01127 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
PDGFBP01127 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFBP01127 AC104297.1-201ENST00000393779 870 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.34□□□□□ -1.55
PDGFBP01127 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFBP01127 AC004074.1-201ENST00000421810 1063 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 ARAFP1-201ENST00000422172 605 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 DDX39BP1-205ENST00000422507 192 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 CHIAP3-201ENST00000423668 1133 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 CRIP1P1-201ENST00000427567 185 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.34□□□□□ -1.55
PDGFBP01127 AC122718.1-201ENST00000439448 744 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFBP01127 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.34□□□□□ -1.55
PDGFBP01127 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.34□□□□□ -1.55
PDGFBP01127 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.34□□□□□ -1.55
PDGFBP01127 FAM133DP-201ENST00000464802 691 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 RPL7P40-201ENST00000481703 745 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.34□□□□□ -1.55
PDGFBP01127 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.34□□□□□ -1.55
PDGFBP01127 AC100784.1-201ENST00000522790 310 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 TRAV11-201ENST00000539512 339 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
PDGFBP01127 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFBP01127 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.34□□□□□ -1.55
PDGFBP01127 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.34□□□□□ -1.55
PDGFBP01127 MIR4675-201ENST00000577898 77 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 AC068790.7-201ENST00000602347 528 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 AP001521.2-201ENST00000608772 546 ntBASIC5.34□□□□□ -1.55
PDGFBP01127 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFBP01127 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFBP01127 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFBP01127 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFBP01127 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFBP01127 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFBP01127 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDGFBP01127 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.34□□□□□ -1.55
PDGFBP01127 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms