Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN2BO60939 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN2BO60939 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN2BO60939 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SCN2BO60939 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN2BO60939 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN2BO60939 RNU4-44P-201ENST00000363050 141 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 AC009804.1-201ENST00000400949 179 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 AL359643.1-201ENST00000404109 423 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 RN7SKP97-201ENST00000410966 333 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 AL389925.1-201ENST00000432257 728 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.84□□□□□ -1.63
SCN2BO60939 AC023141.9-201ENST00000458734 412 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 AC093890.1-201ENST00000502554 540 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN2BO60939 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.84□□□□□ -1.63
SCN2BO60939 RN7SKP34-201ENST00000516142 244 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 IGLVIV-64-201ENST00000518581 301 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN2BO60939 HNRNPRP2-201ENST00000528421 743 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 AC134349.2-201ENST00000535136 910 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN2BO60939 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN2BO60939 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN2BO60939 RN7SL435P-201ENST00000584418 282 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 AL139407.1-201ENST00000613826 1175 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 AC005840.5-201ENST00000619166 599 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.84□□□□□ -1.63
SCN2BO60939 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SCN2BO60939 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN2BO60939 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN2BO60939 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN2BO60939 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN2BO60939 AL672167.1-204ENST00000641875 3017 ntBASIC4.84□□□□□ -1.63
SCN2BO60939 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SCN2BO60939 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.84□□□□□ -1.64
SCN2BO60939 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SCN2BO60939 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SCN2BO60939 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.84□□□□□ -1.64
SCN2BO60939 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SCN2BO60939 AL022393.1-201ENST00000625142 1677 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
SCN2BO60939 AC063976.2-201ENST00000425667 3556 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN2BO60939 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SCN2BO60939 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN2BO60939 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN2BO60939 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN2BO60939 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN2BO60939 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN2BO60939 SNORA2.3-201ENST00000383920 135 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN2BO60939 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN2BO60939 OR5M12P-201ENST00000423388 929 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN2BO60939 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.83□□□□□ -1.64
SCN2BO60939 FAM96AP1-201ENST00000430879 482 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN2BO60939 MRPL35P2-201ENST00000448009 511 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN2BO60939 Z92846.1-201ENST00000456203 268 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 RNA5SP103-201ENST00000459503 118 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 AGGF1P3-201ENST00000493675 1213 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 AL136038.1-201ENST00000497246 351 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 OR4A46P-201ENST00000527255 933 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN2BO60939 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN2BO60939 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN2BO60939 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN2BO60939 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN2BO60939 AGGF1P9-201ENST00000561884 913 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 AC116553.2-201ENST00000564203 463 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 AP005262.1-201ENST00000582646 997 ntBASIC4.83□□□□□ -1.64
SCN2BO60939 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.83□□□□□ -1.64
SCN2BO60939 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN2BO60939 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SCN2BO60939 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN2BO60939 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN2BO60939 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN2BO60939 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN2BO60939 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN2BO60939 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN2BO60939 AC011447.7-201ENST00000624228 1590 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN2BO60939 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN2BO60939 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.82□□□□□ -1.64
SCN2BO60939 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SCN2BO60939 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCN2BO60939 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCN2BO60939 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SCN2BO60939 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SCN2BO60939 U3.2-201ENST00000362981 210 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 RNA5SP132-201ENST00000364725 118 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SCN2BO60939 AL672167.2-201ENST00000377164 879 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 RN7SKP59-201ENST00000410520 314 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 SETP15-201ENST00000412724 337 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 OR51A6P-201ENST00000418680 1004 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN2BO60939 RPL7L1P1-201ENST00000448259 785 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms