Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RPS26P39-201ENST00000469206 341 ntBASIC5.01□□□□□ -1.61
SSX4O60224 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
SSX4O60224 AC008410.1-201ENST00000483777 339 ntBASIC5.01□□□□□ -1.61
SSX4O60224 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX4O60224 NENFP3-201ENST00000503735 313 ntBASIC5.01□□□□□ -1.61
SSX4O60224 MIR2117-201ENST00000516780 80 ntBASIC5.01□□□□□ -1.61
SSX4O60224 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX4O60224 HAUS1P3-201ENST00000523909 662 ntBASIC5.01□□□□□ -1.61
SSX4O60224 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.01□□□□□ -1.61
SSX4O60224 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX4O60224 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX4O60224 AL512310.9-201ENST00000553311 948 ntBASIC5.01□□□□□ -1.61
SSX4O60224 AC127381.1-201ENST00000555979 939 ntBASIC5.01□□□□□ -1.61
SSX4O60224 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX4O60224 MIR3176-201ENST00000582210 90 ntBASIC5.01□□□□□ -1.61
SSX4O60224 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.01□□□□□ -1.61
SSX4O60224 AC015911.5-201ENST00000587076 451 ntBASIC5.01□□□□□ -1.61
SSX4O60224 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.01□□□□□ -1.61
SSX4O60224 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX4O60224 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX4O60224 FO393422.1-201ENST00000603908 708 ntBASIC5.01□□□□□ -1.61
SSX4O60224 AC073137.1-201ENST00000605636 634 ntBASIC5.01□□□□□ -1.61
SSX4O60224 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.01□□□□□ -1.61
SSX4O60224 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX4O60224 AL356274.1-201ENST00000617064 410 ntBASIC5.01□□□□□ -1.61
SSX4O60224 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SSX4O60224 SAMMSON-227ENST00000642114 1199 ntBASIC5.01□□□□□ -1.61
SSX4O60224 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX4O60224 AC104260.2-201ENST00000623551 3497 ntBASIC5.01□□□□□ -1.61
SSX4O60224 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.01□□□□□ -1.61
SSX4O60224 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX4O60224 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SSX4O60224 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX4O60224 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX4O60224 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SSX4O60224 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5□□□□□ -1.61
SSX4O60224 MT-RNR2-201ENST00000387347 1559 ntBASIC5□□□□□ -1.61
SSX4O60224 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5□□□□□ -1.61
SSX4O60224 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSX4O60224 RNU6-609P-201ENST00000365459 107 ntBASIC5□□□□□ -1.61
SSX4O60224 RNA5SP211-201ENST00000365516 117 ntBASIC5□□□□□ -1.61
SSX4O60224 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSX4O60224 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5□□□□□ -1.61
SSX4O60224 AC104297.1-201ENST00000393779 870 ntBASIC5□□□□□ -1.61
SSX4O60224 TAF9BP2-201ENST00000400856 499 ntBASIC5□□□□□ -1.61
SSX4O60224 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5□□□□□ -1.61
SSX4O60224 OR10T1P-201ENST00000424327 947 ntBASIC5□□□□□ -1.61
SSX4O60224 SDR42E1P3-201ENST00000438345 502 ntBASIC5□□□□□ -1.61
SSX4O60224 RPS12P17-201ENST00000438591 377 ntBASIC5□□□□□ -1.61
SSX4O60224 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5□□□□□ -1.61
SSX4O60224 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5□□□□□ -1.61
SSX4O60224 EEF1B2P6-201ENST00000445713 673 ntBASIC5□□□□□ -1.61
SSX4O60224 LRRC37A14P-201ENST00000452297 462 ntBASIC5□□□□□ -1.61
SSX4O60224 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5□□□□□ -1.61
SSX4O60224 EIF2S2P5-201ENST00000457635 968 ntBASIC5□□□□□ -1.61
SSX4O60224 TPT1P1-201ENST00000458495 518 ntBASIC5□□□□□ -1.61
SSX4O60224 AC104164.1-201ENST00000460282 590 ntBASIC5□□□□□ -1.61
SSX4O60224 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5□□□□□ -1.61
SSX4O60224 PFN1P6-201ENST00000476786 399 ntBASIC5□□□□□ -1.61
SSX4O60224 NPM1P17-201ENST00000479221 602 ntBASIC5□□□□□ -1.61
SSX4O60224 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSX4O60224 NPM1P29-201ENST00000483112 803 ntBASIC5□□□□□ -1.61
SSX4O60224 AC116562.1-201ENST00000485355 781 ntBASIC5□□□□□ -1.61
SSX4O60224 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SSX4O60224 RN7SL466P-201ENST00000497546 295 ntBASIC5□□□□□ -1.61
SSX4O60224 RPS17P5-201ENST00000498293 408 ntBASIC5□□□□□ -1.61
SSX4O60224 HMGN1P15-201ENST00000513870 295 ntBASIC5□□□□□ -1.61
SSX4O60224 OR4A17P-201ENST00000526032 904 ntBASIC5□□□□□ -1.61
SSX4O60224 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5□□□□□ -1.61
SSX4O60224 AC113192.3-201ENST00000529152 742 ntBASIC5□□□□□ -1.61
SSX4O60224 HMGN2P36-201ENST00000529541 409 ntBASIC5□□□□□ -1.61
SSX4O60224 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5□□□□□ -1.61
SSX4O60224 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5□□□□□ -1.61
SSX4O60224 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5□□□□□ -1.61
SSX4O60224 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5□□□□□ -1.61
SSX4O60224 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5□□□□□ -1.61
SSX4O60224 AC093510.2-201ENST00000562820 896 ntBASIC5□□□□□ -1.61
SSX4O60224 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSX4O60224 AC016180.1-201ENST00000567945 403 ntBASIC5□□□□□ -1.61
SSX4O60224 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSX4O60224 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSX4O60224 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5□□□□□ -1.61
SSX4O60224 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5□□□□□ -1.61
SSX4O60224 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5□□□□□ -1.61
SSX4O60224 AC104695.2-201ENST00000605056 775 ntBASIC5□□□□□ -1.61
SSX4O60224 AC034236.3-201ENST00000605999 461 ntBASIC5□□□□□ -1.61
SSX4O60224 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5□□□□□ -1.61
SSX4O60224 SDR42E1P1-201ENST00000611327 477 ntBASIC5□□□□□ -1.61
SSX4O60224 BNIP3P41-202ENST00000616656 861 ntBASIC5□□□□□ -1.61
SSX4O60224 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSX4O60224 FRG1DP-201ENST00000635586 771 ntBASIC5□□□□□ -1.61
SSX4O60224 AC106858.1-201ENST00000637497 429 ntBASIC5□□□□□ -1.61
SSX4O60224 AC087565.3-203ENST00000641018 837 ntBASIC5□□□□□ -1.61
SSX4O60224 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SSX4O60224 AL592494.2-201ENST00000425455 1548 ntBASIC5□□□□□ -1.61
SSX4O60224 SAMMSON-213ENST00000641336 1521 ntBASIC5□□□□□ -1.61
SSX4O60224 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5□□□□□ -1.61
SSX4O60224 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSX4O60224 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSX4O60224 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms