Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.21□□□□□ -1.58
RIPK2O43353 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.21□□□□□ -1.58
RIPK2O43353 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.21□□□□□ -1.58
RIPK2O43353 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.21□□□□□ -1.58
RIPK2O43353 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIPK2O43353 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.2□□□□□ -1.58
RIPK2O43353 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIPK2O43353 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.2□□□□□ -1.58
RIPK2O43353 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.2□□□□□ -1.58
RIPK2O43353 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RIPK2O43353 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
RIPK2O43353 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RIPK2O43353 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RIPK2O43353 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIPK2O43353 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RIPK2O43353 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RIPK2O43353 RN7SKP247-201ENST00000411094 308 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 RPL34P3-201ENST00000421454 338 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RIPK2O43353 AC012519.1-201ENST00000424588 610 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 AL121578.1-201ENST00000428051 892 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 AL450263.2-201ENST00000439400 589 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 FHP1-201ENST00000442741 703 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.2□□□□□ -1.58
RIPK2O43353 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.2□□□□□ -1.58
RIPK2O43353 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.2□□□□□ -1.58
RIPK2O43353 AP002884.1-201ENST00000479691 655 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 RPL9P15-201ENST00000491096 532 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 RN7SL441P-201ENST00000492388 296 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.2□□□□□ -1.58
RIPK2O43353 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.2□□□□□ -1.58
RIPK2O43353 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.2□□□□□ -1.58
RIPK2O43353 AC025857.1-201ENST00000525252 377 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 AC005000.1-201ENST00000536192 288 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.2□□□□□ -1.58
RIPK2O43353 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.2□□□□□ -1.58
RIPK2O43353 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.2□□□□□ -1.58
RIPK2O43353 AL049830.4-201ENST00000555149 351 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RIPK2O43353 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.2□□□□□ -1.58
RIPK2O43353 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RIPK2O43353 AL359091.2-201ENST00000609303 556 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 AC073592.6-201ENST00000624271 415 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.2□□□□□ -1.58
RIPK2O43353 AC093535.2-201ENST00000624769 2326 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 BX005019.1-201ENST00000561881 1810 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIPK2O43353 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.2□□□□□ -1.58
RIPK2O43353 SALL4P2-201ENST00000423288 2910 ntBASIC5.2□□□□□ -1.58
RIPK2O43353 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIPK2O43353 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RIPK2O43353 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIPK2O43353 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIPK2O43353 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIPK2O43353 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RIPK2O43353 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.19□□□□□ -1.58
RIPK2O43353 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIPK2O43353 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.19□□□□□ -1.58
RIPK2O43353 U3.3-201ENST00000362986 216 ntBASIC5.19□□□□□ -1.58
RIPK2O43353 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.19□□□□□ -1.58
RIPK2O43353 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIPK2O43353 RN7SKP97-201ENST00000410966 333 ntBASIC5.19□□□□□ -1.58
RIPK2O43353 OR2AT2P-201ENST00000413438 905 ntBASIC5.19□□□□□ -1.58
RIPK2O43353 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.19□□□□□ -1.58
RIPK2O43353 GAPDHP34-201ENST00000432112 823 ntBASIC5.19□□□□□ -1.58
RIPK2O43353 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.19□□□□□ -1.58
RIPK2O43353 SUMO2P3-201ENST00000438311 288 ntBASIC5.19□□□□□ -1.58
RIPK2O43353 PCNPP2-201ENST00000441651 455 ntBASIC5.19□□□□□ -1.58
RIPK2O43353 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.19□□□□□ -1.58
RIPK2O43353 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RIPK2O43353 AC090686.1-201ENST00000481577 749 ntBASIC5.19□□□□□ -1.58
RIPK2O43353 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.19□□□□□ -1.58
RIPK2O43353 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.19□□□□□ -1.58
RIPK2O43353 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.19□□□□□ -1.58
RIPK2O43353 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.19□□□□□ -1.58
RIPK2O43353 AC011853.1-201ENST00000518911 454 ntBASIC5.19□□□□□ -1.58
RIPK2O43353 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.19□□□□□ -1.58
RIPK2O43353 HMGB1P40-201ENST00000525121 540 ntBASIC5.19□□□□□ -1.58
RIPK2O43353 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.19□□□□□ -1.58
RIPK2O43353 AL512310.9-201ENST00000553311 948 ntBASIC5.19□□□□□ -1.58
RIPK2O43353 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.19□□□□□ -1.58
RIPK2O43353 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.19□□□□□ -1.58
RIPK2O43353 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.19□□□□□ -1.58
RIPK2O43353 AC079315.1-201ENST00000602952 623 ntBASIC5.19□□□□□ -1.58
RIPK2O43353 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.19□□□□□ -1.58
RIPK2O43353 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.19□□□□□ -1.58
RIPK2O43353 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIPK2O43353 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RIPK2O43353 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIPK2O43353 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
RIPK2O43353 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.19□□□□□ -1.58
RIPK2O43353 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RIPK2O43353 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIPK2O43353 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
RIPK2O43353 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RIPK2O43353 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIPK2O43353 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RIPK2O43353 AL445437.1-201ENST00000623157 3087 ntBASIC5.18□□□□□ -1.58
RIPK2O43353 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RIPK2O43353 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms