Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.22□□□□□ -1.73
SDCBPO00560 AC073052.1-201ENST00000440417 714 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 AC112206.1-201ENST00000468416 477 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.22□□□□□ -1.73
SDCBPO00560 AC117394.1-201ENST00000477323 567 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 RN7SL441P-201ENST00000492388 296 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SDCBPO00560 ENPP7P9-201ENST00000514456 627 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SDCBPO00560 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.22□□□□□ -1.73
SDCBPO00560 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.22□□□□□ -1.73
SDCBPO00560 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.22□□□□□ -1.73
SDCBPO00560 AC134349.2-201ENST00000535136 910 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.22□□□□□ -1.73
SDCBPO00560 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SDCBPO00560 MIR4310-201ENST00000582950 57 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.22□□□□□ -1.73
SDCBPO00560 AC090527.3-201ENST00000619041 548 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SDCBPO00560 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SDCBPO00560 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.22□□□□□ -1.73
SDCBPO00560 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SDCBPO00560 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SDCBPO00560 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SDCBPO00560 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SDCBPO00560 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SDCBPO00560 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SDCBPO00560 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.22□□□□□ -1.73
SDCBPO00560 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.21□□□□□ -1.73
SDCBPO00560 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.73
SDCBPO00560 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
SDCBPO00560 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
SDCBPO00560 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SDCBPO00560 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.21□□□□□ -1.74
SDCBPO00560 RNU1-43P-201ENST00000365052 165 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 NUDT19P3-201ENST00000404698 555 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.21□□□□□ -1.74
SDCBPO00560 TMBIM7P-201ENST00000418074 855 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.21□□□□□ -1.74
SDCBPO00560 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.21□□□□□ -1.74
SDCBPO00560 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.21□□□□□ -1.74
SDCBPO00560 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.21□□□□□ -1.74
SDCBPO00560 AL161722.1-201ENST00000446972 1032 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 AL606490.1-201ENST00000452266 765 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 AL691482.1-201ENST00000453255 87 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.21□□□□□ -1.74
SDCBPO00560 AC009127.1-201ENST00000467090 155 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.21□□□□□ -1.74
SDCBPO00560 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.21□□□□□ -1.74
SDCBPO00560 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.21□□□□□ -1.74
SDCBPO00560 PGAM1P13-201ENST00000507497 754 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 RPL7L1P4-201ENST00000513004 707 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 IGKV2-18-201ENST00000522607 343 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.21□□□□□ -1.74
SDCBPO00560 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.21□□□□□ -1.74
SDCBPO00560 AL390726.5-202ENST00000564800 256 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.21□□□□□ -1.74
SDCBPO00560 TAS2R6P-201ENST00000605022 826 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.21□□□□□ -1.74
SDCBPO00560 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.21□□□□□ -1.74
SDCBPO00560 AC008115.4-201ENST00000619780 775 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SDCBPO00560 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.21□□□□□ -1.74
SDCBPO00560 MIR4302-201ENST00000638058 60 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SDCBPO00560 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SDCBPO00560 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SDCBPO00560 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.21□□□□□ -1.74
SDCBPO00560 MAPK10-349ENST00000641767 3661 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SDCBPO00560 AC139713.2-215ENST00000641428 5037 ntBASIC4.21□□□□□ -1.74
SDCBPO00560 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.21□□□□□ -1.74
SDCBPO00560 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.21□□□□□ -1.74
SDCBPO00560 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SDCBPO00560 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SDCBPO00560 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.2□□□□□ -1.74
SDCBPO00560 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SDCBPO00560 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SDCBPO00560 AL132656.3-201ENST00000606384 1595 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.2□□□□□ -1.74
SDCBPO00560 RNA5SP183-201ENST00000362452 119 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 SNORA17.1-201ENST00000362945 126 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 RN7SKP162-201ENST00000363605 345 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 AL353625.1-202ENST00000366273 571 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SDCBPO00560 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SDCBPO00560 AL512422.1-201ENST00000407033 553 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SDCBPO00560 RN7SKP125-201ENST00000410481 302 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 EIF4A1P1-201ENST00000420241 934 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 CHEK2P5-201ENST00000423877 246 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.2□□□□□ -1.74
SDCBPO00560 AL450023.3-201ENST00000440592 271 ntBASIC4.2□□□□□ -1.74
SDCBPO00560 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.2□□□□□ -1.74
SDCBPO00560 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.2□□□□□ -1.74
SDCBPO00560 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SDCBPO00560 RN7SL346P-201ENST00000491561 294 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms