Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN5O00501 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN5O00501 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN5O00501 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CLDN5O00501 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CLDN5O00501 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN5O00501 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN5O00501 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CLDN5O00501 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN5O00501 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN5O00501 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CLDN5O00501 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN5O00501 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN5O00501 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN5O00501 CUL4AP1-201ENST00000514750 1863 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN5O00501 AP002530.1-201ENST00000405705 684 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN5O00501 AC104837.2-201ENST00000427236 424 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 RPS29P9-201ENST00000440360 171 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 AL450023.3-201ENST00000440592 271 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 AC112498.1-201ENST00000444401 332 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 OR52Y1P-201ENST00000452418 828 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 AL691482.1-201ENST00000453255 87 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 CBX1P2-201ENST00000453841 458 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN5O00501 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN5O00501 RPS3AP41-201ENST00000462701 778 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 AC128716.1-201ENST00000475129 166 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 AL133372.1-201ENST00000493565 745 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 RN7SL591P-201ENST00000496150 292 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN5O00501 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN5O00501 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN5O00501 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CLDN5O00501 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN5O00501 NDUFB4P11-201ENST00000560510 395 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 AP005901.4-201ENST00000577336 569 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 BNIP3P32-201ENST00000600015 554 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 AC005377.1-201ENST00000605126 456 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN5O00501 AC073575.2-201ENST00000614212 627 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN5O00501 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN5O00501 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN5O00501 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN5O00501 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN5O00501 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN5O00501 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN5O00501 AC092111.2-201ENST00000611627 1414 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 AL022311.1-201ENST00000623726 19416 ntBASIC5.29□□□□□ -1.56
CLDN5O00501 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLDN5O00501 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN5O00501 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
CLDN5O00501 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CLDN5O00501 AC011503.2-201ENST00000594230 1500 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN5O00501 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN5O00501 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN5O00501 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN5O00501 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN5O00501 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN5O00501 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLDN5O00501 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN5O00501 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN5O00501 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN5O00501 COX5BP7-201ENST00000414780 274 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 MGAT2P2-201ENST00000427194 797 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN5O00501 RPL7P11-201ENST00000437586 658 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN5O00501 AC004980.3-201ENST00000447046 365 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 RPL31P44-201ENST00000447680 377 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 AL645937.3-201ENST00000453647 936 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 RPS3AP53-201ENST00000454716 778 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN5O00501 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN5O00501 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CLDN5O00501 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN5O00501 MORF4L1P3-201ENST00000525966 950 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 AC021006.3-201ENST00000530771 192 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN5O00501 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN5O00501 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN5O00501 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN5O00501 MIR3934-201ENST00000579806 107 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 AC011487.3-201ENST00000593607 453 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN5O00501 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN5O00501 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN5O00501 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN5O00501 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN5O00501 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN5O00501 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN5O00501 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.28□□□□□ -1.56
CLDN5O00501 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN5O00501 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN5O00501 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN5O00501 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms