Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 RPL34P6-201ENST00000432390 345 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AL049745.1-201ENST00000433953 286 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AL161722.2-201ENST00000434731 981 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC073465.2-201ENST00000440938 498 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 RPS3AP41-201ENST00000462701 778 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC092324.1-201ENST00000468671 324 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC022133.1-201ENST00000490961 571 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 OR5AZ1P-201ENST00000527448 943 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 MIR7853-201ENST00000584820 132 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC009027.1-201ENST00000604510 479 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 FAM25E-202ENST00000608562 189 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AP001642.1-201ENST00000624727 2117 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC012618.3-205ENST00000637896 1496 ntBASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.06□□□□□ -1.6
TMX2-CTNND1H3BSU7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC015813.6-201ENST00000624409 5808 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 TRIM51GP-201ENST00000534741 1350 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 GVINP1-202ENST00000531871 7271 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 RPS4XP9-201ENST00000405151 780 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC104837.2-201ENST00000427236 424 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 USP9YP9-201ENST00000429406 715 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 HSPE1P27-201ENST00000430808 296 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 KNOP1P3-201ENST00000446933 426 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 NDUFA5P8-201ENST00000449019 346 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 RN7SL244P-201ENST00000493405 297 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 USP9YP2-201ENST00000504503 1000 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 USP9YP1-201ENST00000513521 1002 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC022360.1-201ENST00000521058 340 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC073869.10-201ENST00000642016 354 ntBASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMX2-CTNND1H3BSU7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 AC005005.4-201ENST00000623789 16698 ntBASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TMX2-CTNND1H3BSU7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms