Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC005753.1-201ENST00000623837 618 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 AC091905.1-201ENST00000624400 311 ntBASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHGA11Q9Y5H2 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 UGT2B27P-201ENST00000505092 1620 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC022819.1-201ENST00000563495 3910 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC122713.2-201ENST00000624942 3335 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 Y_RNA.86-201ENST00000363020 111 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 U8.3-201ENST00000363321 132 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 RNU6-767P-201ENST00000384132 107 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AL390316.1-201ENST00000406279 553 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 MIR1305-201ENST00000408300 86 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 SDCBPP2-201ENST00000424643 885 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC092106.2-201ENST00000436597 487 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 RPL34P22-201ENST00000468193 318 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC040975.1-201ENST00000472104 316 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC084878.1-201ENST00000480555 648 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC073648.3-201ENST00000504939 925 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AP003122.4-201ENST00000530980 758 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 OR5F2P-201ENST00000532761 941 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 MIR5192-201ENST00000579892 92 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AP001180.3-201ENST00000582221 145 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 MIR544B-201ENST00000582372 78 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 MIR7973-1-201ENST00000614683 76 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC110769.3-201ENST00000624567 1173 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 ATE1-AS1-202ENST00000636460 506 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AC003973.3-201ENST00000624863 2822 ntBASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHGA11Q9Y5H2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHGA11Q9Y5H2 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms