Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
NINLQ9Y2I6 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC7.09□□□□□ -1.27
NINLQ9Y2I6 AC073575.2-201ENST00000614212 627 ntBASIC7.09□□□□□ -1.27
NINLQ9Y2I6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.09□□□□□ -1.27
NINLQ9Y2I6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NINLQ9Y2I6 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.09□□□□□ -1.27
NINLQ9Y2I6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NINLQ9Y2I6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
NINLQ9Y2I6 RNA5SP388-201ENST00000362584 119 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 RN7SKP95-201ENST00000362860 303 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 RN7SKP227-201ENST00000364445 330 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 SNORA5.1-201ENST00000384275 131 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AC117434.1-201ENST00000419971 836 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 RPL19P16-201ENST00000433839 588 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 TRIM60P9Y-201ENST00000438459 816 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 TRIM60P11Y-201ENST00000445313 801 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AC012512.1-201ENST00000446594 718 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 RPL21P129-201ENST00000491732 478 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 PPM1AP1-201ENST00000502740 1135 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 HMGB1P23-201ENST00000518743 568 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 OR7E128P-201ENST00000532736 1024 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AC006338.2-201ENST00000616864 791 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AC091905.4-201ENST00000623432 202 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 RNU1-85P-201ENST00000364127 164 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 MIR1193-201ENST00000408109 78 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AC092570.3-201ENST00000420113 693 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 KCTD10P1-201ENST00000434203 625 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 OR7E125P-201ENST00000443450 846 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 CYCSP42-201ENST00000450823 238 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 RNA5SP43-201ENST00000516559 110 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 MEMO1P5-201ENST00000604810 406 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 MIR92B-201ENST00000607575 96 ntBASIC7.08□□□□□ -1.28
NINLQ9Y2I6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC7.08□□□□□ -1.28
NINLQ9Y2I6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 AC004656.1-201ENST00000568479 4951 ntBASIC7.07□□□□□ -1.28
NINLQ9Y2I6 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 EEF1A1P36-201ENST00000427807 1351 ntBASIC7.07□□□□□ -1.28
NINLQ9Y2I6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 AL137058.3-201ENST00000624531 3099 ntBASIC7.07□□□□□ -1.28
NINLQ9Y2I6 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 RN7SKP149-201ENST00000363008 344 ntBASIC7.07□□□□□ -1.28
NINLQ9Y2I6 SNORA11F-201ENST00000408237 128 ntBASIC7.07□□□□□ -1.28
NINLQ9Y2I6 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 AC068287.1-201ENST00000430283 295 ntBASIC7.07□□□□□ -1.28
NINLQ9Y2I6 AC008072.1-201ENST00000434254 824 ntBASIC7.07□□□□□ -1.28
NINLQ9Y2I6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 HMGN2P25-201ENST00000486956 268 ntBASIC7.07□□□□□ -1.28
NINLQ9Y2I6 NPM1P28-201ENST00000492269 840 ntBASIC7.07□□□□□ -1.28
NINLQ9Y2I6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NINLQ9Y2I6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NINLQ9Y2I6 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.06□□□□□ -1.28
NINLQ9Y2I6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC7.06□□□□□ -1.28
NINLQ9Y2I6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NINLQ9Y2I6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NINLQ9Y2I6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NINLQ9Y2I6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NINLQ9Y2I6 AC092376.2-201ENST00000622621 4116 ntBASIC7.06□□□□□ -1.28
NINLQ9Y2I6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms