Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 MIR589-201ENST00000385238 99 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AL050305.1-201ENST00000399993 1230 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 NOP56P2-201ENST00000447491 769 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 BX842559.2-201ENST00000451418 605 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AL606490.1-201ENST00000452266 765 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 Z92846.1-201ENST00000456203 268 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AC093827.1-201ENST00000480094 861 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 RN7SL814P-201ENST00000487715 300 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 GTF2F2P1-201ENST00000511083 675 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 RN7SL708P-201ENST00000580952 299 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AC008814.1-201ENST00000603797 406 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AC011626.1-201ENST00000604710 562 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AL034370.1-201ENST00000397254 1590 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 AL513548.1-201ENST00000562904 1724 ntBASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAPPC4Q9Y296 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
TRAPPC4Q9Y296 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.71□□□□□ -1.65
TRAPPC4Q9Y296 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 RNA5SP90-201ENST00000364801 99 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 RN7SKP269-201ENST00000365545 319 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 SNORA81-201ENST00000408493 178 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 RNA5SP296-201ENST00000410523 111 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 EIF4A1P1-201ENST00000420241 934 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 RPS4XP16-201ENST00000427198 791 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 RPS29P10-201ENST00000439197 166 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 MRPL35P2-201ENST00000448009 511 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 CYCSP34-201ENST00000458172 304 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 AC015864.1-201ENST00000496512 544 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 AC018695.5-201ENST00000605872 315 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 AC109309.2-201ENST00000612597 332 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 MIR6862-1-201ENST00000613016 70 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 AL354950.1-201ENST00000614150 568 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 MIR6862-2-201ENST00000614755 70 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 AC008115.4-201ENST00000619780 775 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 CYP4F35P-202ENST00000636121 390 ntBASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRAPPC4Q9Y296 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 U3.3-201ENST00000362986 216 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms