Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 SNORA27.3-201ENST00000364937 134 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AC016739.1-201ENST00000405359 345 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 RN7SKP29-201ENST00000410957 272 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 RPSAP35-201ENST00000413753 818 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 OR6E1P-201ENST00000414424 923 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 RPL35AP3-201ENST00000414680 288 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 NIFKP3-201ENST00000417799 865 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 RPL7P56-201ENST00000429441 717 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 LINC00328-2P-201ENST00000436585 219 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 PCBP2P1-201ENST00000437262 977 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 EIF5AP4-201ENST00000441206 465 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 ATP5LP5-201ENST00000483050 299 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 RPL32P33-201ENST00000487023 394 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 RN7SL57P-201ENST00000493687 290 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AC083829.1-201ENST00000503756 657 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 IGLVIV-64-201ENST00000518581 301 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 VTA1P2-201ENST00000520205 911 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 WBP1LP3-201ENST00000523033 208 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 IGLV3-30-201ENST00000524362 298 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 OR5AM1P-201ENST00000532136 1032 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 RN7SL290P-201ENST00000578661 300 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AL158196.1-201ENST00000616786 434 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 AC104623.2-202ENST00000623477 4002 ntBASIC4.28□□□□□ -1.72
RPH3ALQ9UNE2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
RPH3ALQ9UNE2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
RPH3ALQ9UNE2 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
RPH3ALQ9UNE2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.28□□□□□ -1.73
RPH3ALQ9UNE2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 AC235565.1-201ENST00000456962 1325 ntBASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 AC022893.2-201ENST00000564832 3296 ntBASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 CCT8P1-201ENST00000413611 1657 ntBASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 RNA5SP498-201ENST00000411342 120 ntBASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 RPSAP32-201ENST00000432681 526 ntBASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 NDUFB4P8-201ENST00000435351 367 ntBASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 TUBB4BP6-201ENST00000437576 479 ntBASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 AC011225.1-201ENST00000457751 369 ntBASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 RN7SL254P-201ENST00000460609 284 ntBASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 RPL9P15-201ENST00000491096 532 ntBASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 ENPP7P11-201ENST00000505915 627 ntBASIC4.27□□□□□ -1.73
RPH3ALQ9UNE2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms