Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC073488.3-201ENST00000631611 778 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL591379.1-207ENST00000635982 261 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 AL353796.1-201ENST00000561542 3241 ntBASIC6.31□□□□□ -1.4
CD248Q9HCU0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD248Q9HCU0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD248Q9HCU0 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.31□□□□□ -1.4
CD248Q9HCU0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CD248Q9HCU0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD248Q9HCU0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 PARP4P2-201ENST00000446672 3326 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC053481.2-202ENST00000582394 1500 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 RAD1P1-201ENST00000231383 813 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 RNFT1P3-201ENST00000340898 1052 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 RN7SKP69-201ENST00000365390 305 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 RN7SKP81-201ENST00000365603 331 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 U3.43-201ENST00000410734 213 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 RN7SKP144-201ENST00000411108 279 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 RAD23BP2-201ENST00000416003 1207 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC005345.1-201ENST00000431868 217 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 ATG12P2-201ENST00000456830 416 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC018638.3-201ENST00000461273 132 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 PSMA2P2-201ENST00000504319 686 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 MTCO3P7-201ENST00000510008 774 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC106800.3-201ENST00000511389 308 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 RNA5SP271-201ENST00000516700 88 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC103833.1-201ENST00000517442 172 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AL121839.1-201ENST00000556233 1185 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC011270.1-201ENST00000558606 583 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 NPM1P42-201ENST00000560329 862 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC008521.2-201ENST00000591021 259 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 HIRAP1-201ENST00000605318 787 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 MIR6886-201ENST00000619864 61 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 MIR7159-201ENST00000620587 66 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC006840.1-201ENST00000623069 542 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
CD248Q9HCU0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD248Q9HCU0 AC010266.2-201ENST00000564741 3255 ntBASIC6.3□□□□□ -1.4
CD248Q9HCU0 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD248Q9HCU0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
CD248Q9HCU0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CD248Q9HCU0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CD248Q9HCU0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CD248Q9HCU0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.29□□□□□ -1.4
CD248Q9HCU0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms