Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC005771.1-201ENST00000585581 349 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC012175.1-201ENST00000603755 531 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AL352984.2-202ENST00000613699 155 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 MIR6806-201ENST00000622141 64 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AL683826.1-201ENST00000624104 627 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC061999.1-201ENST00000624454 177 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AP003400.5-201ENST00000624827 617 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AL008636.1-201ENST00000625038 1018 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AC034229.2-201ENST00000566945 2508 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 ZNF833P-201ENST00000424938 1494 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AL158152.1-201ENST00000602652 1435 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 AOX3P-204ENST00000491025 2107 ntBASIC6.58□□□□□ -1.36
FOXP3Q9BZS1 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AKAP17BP-201ENST00000431706 2719 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 SAMMSON-210ENST00000641260 1308 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC012020.1-201ENST00000624541 1728 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 RNU6-1283P-201ENST00000365314 105 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 MT-TH-201ENST00000387441 69 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 SNORA26.8-201ENST00000391306 124 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AL356968.2-201ENST00000412769 1257 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 MTCO2P34-201ENST00000421994 607 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 MRPS10P2-201ENST00000431226 381 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 OR52I1-201ENST00000450052 1050 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 HMGB1P5-202ENST00000451497 985 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC118758.1-202ENST00000454719 225 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC022206.1-201ENST00000495947 347 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC106822.1-201ENST00000502647 526 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 SNORA31.13-201ENST00000516624 135 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC008429.4-201ENST00000521201 182 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC013701.1-201ENST00000522657 465 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AP002963.1-201ENST00000530590 184 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC037479.1-201ENST00000558361 625 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 HMGN2P47-201ENST00000559378 272 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AL512347.1-201ENST00000566420 503 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 MT1CP-201ENST00000567054 174 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 MIR4271-201ENST00000582451 67 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AL021368.3-201ENST00000607119 578 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC012676.3-201ENST00000614983 479 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AL035661.1-201ENST00000620459 1144 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC124312.6-202ENST00000623624 418 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC116667.2-201ENST00000641075 823 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 MTCO1P18-201ENST00000455518 1419 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AC073429.2-201ENST00000569694 1444 ntBASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXP3Q9BZS1 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AC087359.1-201ENST00000508335 1740 ntBASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
FOXP3Q9BZS1 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms