Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC044792.1-201ENST00000593294 196 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC009220.3-201ENST00000604318 586 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AL390208.1-201ENST00000605885 644 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC009994.1-201ENST00000606889 253 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC093635.1-201ENST00000609028 555 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AL136981.2-201ENST00000617319 734 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC073569.3-201ENST00000619055 682 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC131009.3-201ENST00000621809 287 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AL596275.2-208ENST00000641192 594 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AL354702.2-202ENST00000641481 890 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC093278.2-201ENST00000564956 2485 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC132825.1-201ENST00000463573 2247 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 HSPD1P7-201ENST00000447985 1686 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC096992.2-201ENST00000609553 1684 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AL133243.2-201ENST00000610331 1621 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 MIR541-201ENST00000401360 84 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 FGF7P8-201ENST00000402994 292 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AL929472.1-201ENST00000417484 429 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC092106.2-201ENST00000436597 487 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 RPL23AP76-201ENST00000441860 458 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 HMGN1P10-201ENST00000474557 553 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 RN7SL413P-201ENST00000482700 297 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC108941.1-201ENST00000502853 530 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 FAM92A1P2-202ENST00000504766 877 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC092375.1-201ENST00000550410 637 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 OR11J2P-201ENST00000555298 907 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC090826.1-203ENST00000569235 490 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC004232.1-201ENST00000571388 208 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 MIR3912-201ENST00000577566 105 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AP001542.2-201ENST00000593141 364 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC068790.7-201ENST00000602347 528 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AP001267.4-201ENST00000602598 545 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AP000907.4-201ENST00000604143 237 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 CYCSP1-201ENST00000604815 315 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AP000860.1-201ENST00000605250 559 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 PART1_1.1-201ENST00000611761 217 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms