Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 SUGT1P2-201ENST00000379452 992 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 RNY3P9-201ENST00000384727 106 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 HMGB1P10-201ENST00000395823 563 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 PPIAP9-201ENST00000403866 498 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 RNU2-17P-201ENST00000410290 190 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC079809.1-201ENST00000415468 276 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC008173.1-201ENST00000418901 264 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 MTCO2P21-201ENST00000419780 677 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 DEFB130D-201ENST00000426866 237 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC110602.1-201ENST00000437414 318 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 HLA-DPA3-207ENST00000454398 229 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 RN7SL188P-201ENST00000469842 285 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AP002884.1-201ENST00000479691 655 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 NENFP3-201ENST00000503735 313 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC091912.1-201ENST00000511351 248 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC011853.1-201ENST00000518911 454 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 MRPS16P1-201ENST00000523462 412 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 MTATP6P15-201ENST00000527233 835 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 UBTFL10-201ENST00000528532 562 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC026826.3-201ENST00000561747 158 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC027455.1-201ENST00000574104 594 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC245036.5-201ENST00000596330 847 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC008751.2-201ENST00000597885 980 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC114878.2-201ENST00000604863 1251 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 VN1R9P-201ENST00000614184 867 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC073592.6-201ENST00000624271 415 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AP001052.1-201ENST00000626421 99 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 OR8G3P-202ENST00000641572 1255 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 NEPNP-201ENST00000404786 1371 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 AC079298.1-201ENST00000625026 1619 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 MFSD8-220ENST00000641243 1422 ntBASIC5.74□□□□□ -1.49
ATG4AQ8WYN0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 MT-RNR2-201ENST00000387347 1559 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 NAMPTP1-201ENST00000440465 2514 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 RN7SKP186-201ENST00000365371 303 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC004386.1-201ENST00000393214 761 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 GAPDHP15-201ENST00000398586 975 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 MTCO2P31-201ENST00000402702 684 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AL009179.1-201ENST00000406085 265 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 RPL26P37-201ENST00000411983 438 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC007161.1-204ENST00000423039 460 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 MRPS21P2-201ENST00000424704 264 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC093422.3-201ENST00000428506 305 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 RN7SL741P-201ENST00000482473 289 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC138409.2-202ENST00000507274 458 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AP000648.1-201ENST00000529682 397 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AP000619.2-201ENST00000546014 969 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 AP000769.2-201ENST00000602344 396 ntBASIC5.73□□□□□ -1.49
ATG4AQ8WYN0 MTCO2P22-201ENST00000603246 681 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms