Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
BEST2Q8NFU1 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BEST2Q8NFU1 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.72□□□□□ -1.49
BEST2Q8NFU1 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST2Q8NFU1 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
BEST2Q8NFU1 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
BEST2Q8NFU1 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 RPL23P2-201ENST00000320371 421 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 SNORA17.1-201ENST00000362945 126 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 PEX12P1-201ENST00000400284 1048 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 RN7SKP213-201ENST00000410746 298 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 SDR42E1P3-201ENST00000438345 502 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 TXNP2-201ENST00000443918 295 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 RN7SL610P-201ENST00000463845 291 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 RPS18P6-201ENST00000476880 458 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 AC004453.1-201ENST00000487895 408 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 IGBP1P4-201ENST00000503202 879 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 NDUFA5P12-201ENST00000503796 343 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 AC008628.1-201ENST00000508663 265 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 AC024940.3-201ENST00000538551 316 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 OR11J2P-201ENST00000555298 907 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 AC108738.1-201ENST00000603703 237 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 AC007786.3-201ENST00000615154 596 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 AL132656.3-201ENST00000606384 1595 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
BEST2Q8NFU1 AC092747.4-201ENST00000620519 1861 ntBASIC5.71□□□□□ -1.5
BEST2Q8NFU1 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AP000473.2-201ENST00000602659 1537 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 RNU4-39P-201ENST00000362455 127 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 RNU1-106P-201ENST00000384382 164 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 MIR937-201ENST00000401271 86 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AMZ2P2-201ENST00000406819 1057 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 NPM1P26-201ENST00000426339 738 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 MTND5P8-201ENST00000449817 1083 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AP000797.2-201ENST00000475768 606 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 RN7SL808P-201ENST00000496066 299 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 RPS24P16-201ENST00000497294 392 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 MTND3P3-201ENST00000505004 126 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 GTF2F2P1-201ENST00000511083 675 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AC012400.1-201ENST00000518452 381 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AC022360.1-201ENST00000521058 340 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AC074029.2-201ENST00000551045 634 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 TAS2R6P-201ENST00000605022 826 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AC074276.2-201ENST00000619891 348 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AP000550.3-201ENST00000637734 379 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AC109446.4-201ENST00000623235 2755 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AC120036.2-201ENST00000509729 1474 ntBASIC5.7□□□□□ -1.5
BEST2Q8NFU1 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.7□□□□□ -1.5
BEST2Q8NFU1 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC005261.2-201ENST00000593427 4258 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC004158.1-201ENST00000564508 4319 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms