Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 DPPA3P2-202ENST00000557188 1219 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AC010735.1-201ENST00000567305 1026 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 GARSP1-201ENST00000570895 719 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 MIR1254-2-201ENST00000579553 63 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AL020997.2-201ENST00000602607 184 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AC083865.1-201ENST00000636634 831 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AP001541.1-201ENST00000623322 1904 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 MTND5P11-201ENST00000511037 1812 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 ICE2P1-201ENST00000512800 1849 ntBASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SMC1BQ8NDV3 AL359715.4-201ENST00000606629 1436 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 TNPO1P2-201ENST00000426249 2665 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 RNA5SP335-201ENST00000363817 110 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 SNORA70H-201ENST00000383910 135 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 SNORA70J-201ENST00000384182 135 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 CHMP1B2P-201ENST00000399581 597 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 PCNPP4-201ENST00000414817 517 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AC009506.2-201ENST00000420635 840 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AC044797.1-201ENST00000445744 679 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 TPT1P1-201ENST00000458495 518 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AC092691.2-201ENST00000461787 803 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AC020779.1-201ENST00000478757 796 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 NPM1P27-201ENST00000502784 830 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AC093720.1-201ENST00000505681 714 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 RN7SKP99-201ENST00000517028 307 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AC104229.1-201ENST00000561364 255 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AP002802.2-201ENST00000605877 235 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AC000068.2-201ENST00000608816 460 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 AC083809.1-201ENST00000615051 472 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 NLRP3P1-201ENST00000622303 1785 ntBASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.84□□□□□ -1.31
SMC1BQ8NDV3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SMC1BQ8NDV3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SMC1BQ8NDV3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AC114947.2-201ENST00000565748 2125 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 SNORA67-201ENST00000384423 137 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 HMGB1P10-201ENST00000395823 563 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AP002784.2-201ENST00000397300 549 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 GTF2IP5-201ENST00000414608 731 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AL451136.1-201ENST00000435399 325 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AL138787.1-202ENST00000437804 898 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 EXOSC3P1-201ENST00000448649 500 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AL009048.1-201ENST00000450437 298 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AC073594.1-201ENST00000462065 364 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 HMGB1P38-201ENST00000490557 577 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 SNORA58-201ENST00000505219 137 ntBASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.83□□□□□ -1.32
SMC1BQ8NDV3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms