Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 RNA5SP428-201ENST00000365129 132 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 MIR192-201ENST00000384915 110 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 RN7SKP114-201ENST00000410327 279 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AL590139.1-201ENST00000416267 400 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC009506.2-201ENST00000420635 840 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 PRPF38AP2-201ENST00000438179 851 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 MTND4LP12-201ENST00000448237 295 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC108751.3-201ENST00000461814 1020 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 TRBV8-1-201ENST00000481590 279 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC008897.1-201ENST00000494006 347 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC140172.1-201ENST00000502928 141 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 IGBP1P4-201ENST00000503202 879 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AP001960.1-201ENST00000506494 658 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 OR7H2P-201ENST00000513483 306 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 HMGN1P9-201ENST00000515212 298 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 OR7E128P-201ENST00000532736 1024 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AF230666.2-201ENST00000602328 725 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC008814.1-201ENST00000603797 406 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AP003400.2-201ENST00000624036 666 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 AC099654.6-201ENST00000636487 512 ntBASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COLGALT1Q8NBJ5 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 AC010132.2-201ENST00000295493 1043 ntBASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 PPP1R11P1-201ENST00000486095 376 ntBASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 COX6B1P5-201ENST00000509843 249 ntBASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 MEMO1P5-201ENST00000604810 406 ntBASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 AP005131.7-201ENST00000610087 611 ntBASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 AL022311.1-201ENST00000623726 19416 ntBASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COLGALT1Q8NBJ5 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 AL513548.1-201ENST00000562904 1724 ntBASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 MTHFD2P5-201ENST00000320415 844 ntBASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 AC079809.1-201ENST00000415468 276 ntBASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 RPL21P133-201ENST00000443666 476 ntBASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 AC138409.2-202ENST00000507274 458 ntBASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 NPM1P21-201ENST00000513394 762 ntBASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 AC006427.1-201ENST00000514359 712 ntBASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 RNU4-18P-201ENST00000516751 149 ntBASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.54□□□□□ -1.52
COLGALT1Q8NBJ5 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms