Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.81□□□□□ -1.64
CROCCP3Q8IVE0 AC107068.1-201ENST00000563286 4218 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 RN7SKP153-201ENST00000365026 316 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AC013429.2-201ENST00000418798 781 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AL590762.3-201ENST00000436372 640 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 GAPDHP48-201ENST00000436626 961 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AC005077.1-201ENST00000449226 375 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 RN7SL502P-201ENST00000481857 290 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AC093663.2-201ENST00000484625 313 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 RN7SL267P-201ENST00000485107 261 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 DUTP7-201ENST00000507982 486 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AC108103.1-201ENST00000511286 446 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 ZNF519P4-201ENST00000514008 125 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 RNU6-467P-201ENST00000517027 110 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 GSTP1P1-201ENST00000548078 319 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AL358913.1-201ENST00000554342 121 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 RPL21P7-201ENST00000557463 483 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AC133552.5-201ENST00000604266 540 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 SNX18P1Y-201ENST00000616231 511 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 AC109583.2-201ENST00000617367 129 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 CFTRP2-201ENST00000634304 199 ntBASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CROCCP3Q8IVE0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 RNA5SP372-201ENST00000390836 115 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AL353692.2-201ENST00000407054 335 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 RN7SKP108-201ENST00000411367 328 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 RPS6P23-201ENST00000413224 722 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 CEACAMP8-201ENST00000413902 580 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 TMBIM7P-201ENST00000418074 855 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC007161.1-204ENST00000423039 460 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC124944.2-201ENST00000429866 1242 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 MTND2P21-201ENST00000436242 1042 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 SCAND3P1-201ENST00000439854 1060 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 RPS26P2-201ENST00000440331 348 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 RPL7L1P1-201ENST00000448259 785 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC002553.2-201ENST00000453217 340 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 HMGB3P13-201ENST00000511263 607 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC021678.3-201ENST00000517893 476 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC134349.2-201ENST00000535136 910 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 NOP56P3-201ENST00000549457 385 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC122134.1-201ENST00000565664 1104 ntBASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC4.79□□□□□ -1.64
CROCCP3Q8IVE0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 315.4 ms