Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 AC068446.1-201ENST00000556425 1549 ntBASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.02□□□□□ -1.61
NUDCD3Q8IVD9 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AC023490.2-201ENST00000359859 470 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 RNU4-44P-201ENST00000363050 141 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 GAPDHP15-201ENST00000398586 975 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 LYPLA1P3-201ENST00000402650 695 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 RN7SKP97-201ENST00000410966 333 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 DNAJA1P5-201ENST00000440278 943 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 TXNP5-201ENST00000441043 315 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 RANP1-206ENST00000455094 651 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AP002371.1-201ENST00000463604 433 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 IGKV2-4-201ENST00000523070 340 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AC022616.2-201ENST00000523185 300 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AC005363.1-201ENST00000530779 351 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AL512310.9-201ENST00000553311 948 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 CYCSP40-201ENST00000575927 294 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 MIR1273E-201ENST00000581165 102 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AC108865.2-201ENST00000606881 432 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 AL096712.1-201ENST00000614561 159 ntBASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.01□□□□□ -1.61
NUDCD3Q8IVD9 SALL4P2-201ENST00000423288 2910 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 AC087190.4-201ENST00000574616 8334 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 RN7SKP113-201ENST00000363891 295 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 RNA5SP234-201ENST00000363916 119 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 RNU1-149P-201ENST00000390870 161 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 SLC20A1P1-201ENST00000413906 956 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 QRSL1P2-201ENST00000418582 964 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 CYCSP34-201ENST00000458172 304 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 TRBV8-1-201ENST00000481590 279 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 AC093890.1-201ENST00000502554 540 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 AC074087.1-201ENST00000512059 724 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 AL390726.5-202ENST00000564800 256 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 AC010245.2-201ENST00000606908 1167 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 AP003400.2-201ENST00000624036 666 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 CR382285.2-201ENST00000624662 1495 ntBASIC5□□□□□ -1.61
NUDCD3Q8IVD9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5□□□□□ -1.61
NUDCD3Q8IVD9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUDCD3Q8IVD9 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms