Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTTNQ86VV8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTTNQ86VV8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTTNQ86VV8 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTTNQ86VV8 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
RTTNQ86VV8 AC015813.6-201ENST00000624409 5808 ntBASIC4.54□□□□□ -1.68
RTTNQ86VV8 AP000432.2-201ENST00000624164 2048 ntBASIC4.54□□□□□ -1.68
RTTNQ86VV8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTTNQ86VV8 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 OR1L6-202ENST00000373684 1044 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC007064.3-201ENST00000422608 359 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 RPL5P2-201ENST00000429598 854 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 HMGB1P4-201ENST00000455362 567 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 RPS29P33-201ENST00000456717 146 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 PSAT1P4-201ENST00000466500 526 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 CR383656.1-201ENST00000484916 377 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 RPS24P16-201ENST00000497294 392 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 OR7H2P-201ENST00000513483 306 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC034105.4-201ENST00000568304 277 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTTNQ86VV8 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC114947.2-201ENST00000565748 2125 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTTNQ86VV8 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTTNQ86VV8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC011493.1-201ENST00000596753 1632 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RTTNQ86VV8 CASC19-281ENST00000642118 1554 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTTNQ86VV8 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 RNU1-43P-201ENST00000365052 165 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 SNORA67-201ENST00000384423 137 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 SNORA48.7-201ENST00000391302 135 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 RPS4XP9-201ENST00000405151 780 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC004690.1-201ENST00000418216 328 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 RPL7P11-201ENST00000437586 658 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 KNOP1P3-201ENST00000446933 426 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 NDUFA12P1-201ENST00000455914 406 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC002075.1-201ENST00000457396 676 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC021006.3-201ENST00000530771 192 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC024940.3-201ENST00000538551 316 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 MIR4277-201ENST00000578298 84 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 MTCYBP13-201ENST00000578634 1093 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 MIR92B-201ENST00000607575 96 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC007786.3-201ENST00000615154 596 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 AC026367.3-201ENST00000619032 590 ntBASIC4.53□□□□□ -1.68
RTTNQ86VV8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTTNQ86VV8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.53□□□□□ -1.68
RTTNQ86VV8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTTNQ86VV8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.52□□□□□ -1.69
RTTNQ86VV8 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RTTNQ86VV8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTTNQ86VV8 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.52□□□□□ -1.69
RTTNQ86VV8 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.52□□□□□ -1.69
RTTNQ86VV8 ZNF733P-202ENST00000444809 1573 ntBASIC4.52□□□□□ -1.69
RTTNQ86VV8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTTNQ86VV8 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RTTNQ86VV8 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RTTNQ86VV8 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.52□□□□□ -1.69
RTTNQ86VV8 SNORA48.4-201ENST00000391089 134 ntBASIC4.52□□□□□ -1.69
RTTNQ86VV8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.52□□□□□ -1.69
RTTNQ86VV8 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RTTNQ86VV8 MRPS21P2-201ENST00000424704 264 ntBASIC4.52□□□□□ -1.69
RTTNQ86VV8 AC093655.2-201ENST00000425735 631 ntBASIC4.52□□□□□ -1.69
RTTNQ86VV8 RPL7P16-201ENST00000479738 738 ntBASIC4.52□□□□□ -1.69
RTTNQ86VV8 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RTTNQ86VV8 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.52□□□□□ -1.69
RTTNQ86VV8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.52□□□□□ -1.69
RTTNQ86VV8 RN7SKP147-201ENST00000517154 244 ntBASIC4.52□□□□□ -1.69
RTTNQ86VV8 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms