Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC091959.2-201ENST00000477363 321 ntBASIC3.9□□□□□ -1.78
VPS13CQ709C8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.9□□□□□ -1.78
VPS13CQ709C8 AC010476.1-201ENST00000519111 851 ntBASIC3.9□□□□□ -1.78
VPS13CQ709C8 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC3.9□□□□□ -1.78
VPS13CQ709C8 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.9□□□□□ -1.78
VPS13CQ709C8 AC002525.1-201ENST00000624392 1622 ntBASIC3.9□□□□□ -1.78
VPS13CQ709C8 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
VPS13CQ709C8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VPS13CQ709C8 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
VPS13CQ709C8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VPS13CQ709C8 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.9□□□□□ -1.78
VPS13CQ709C8 AC015795.1-201ENST00000513669 327 ntBASIC3.9□□□□□ -1.78
VPS13CQ709C8 MRPL49P2-201ENST00000521066 465 ntBASIC3.9□□□□□ -1.78
VPS13CQ709C8 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.9□□□□□ -1.78
VPS13CQ709C8 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.9□□□□□ -1.78
VPS13CQ709C8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.9□□□□□ -1.78
VPS13CQ709C8 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VPS13CQ709C8 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS13CQ709C8 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS13CQ709C8 AL627171.1-201ENST00000618845 1308 ntBASIC3.9□□□□□ -1.79
VPS13CQ709C8 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS13CQ709C8 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VPS13CQ709C8 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS13CQ709C8 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS13CQ709C8 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS13CQ709C8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS13CQ709C8 AL158163.1-201ENST00000603915 1649 ntBASIC3.9□□□□□ -1.79
VPS13CQ709C8 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS13CQ709C8 YME1L1P1-201ENST00000429435 297 ntBASIC3.9□□□□□ -1.79
VPS13CQ709C8 AC009238.2-201ENST00000431026 355 ntBASIC3.9□□□□□ -1.79
VPS13CQ709C8 AC005412.2-201ENST00000492004 341 ntBASIC3.9□□□□□ -1.79
VPS13CQ709C8 TPT1P3-201ENST00000492841 512 ntBASIC3.9□□□□□ -1.79
VPS13CQ709C8 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS13CQ709C8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS13CQ709C8 AC073137.1-201ENST00000605636 634 ntBASIC3.9□□□□□ -1.79
VPS13CQ709C8 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VPS13CQ709C8 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS13CQ709C8 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
VPS13CQ709C8 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
VPS13CQ709C8 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
VPS13CQ709C8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS13CQ709C8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 AL500522.2-201ENST00000448562 343 ntBASIC3.89□□□□□ -1.79
VPS13CQ709C8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC136777.2-201ENST00000522979 358 ntBASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC243960.7-201ENST00000623532 707 ntBASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC063976.2-201ENST00000425667 3556 ntBASIC3.89□□□□□ -1.79
VPS13CQ709C8 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 AL022722.2-201ENST00000402519 180 ntBASIC3.89□□□□□ -1.79
VPS13CQ709C8 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 AL132765.1-201ENST00000434165 553 ntBASIC3.89□□□□□ -1.79
VPS13CQ709C8 Z95327.1-201ENST00000446082 482 ntBASIC3.89□□□□□ -1.79
VPS13CQ709C8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 MTND4LP2-201ENST00000502312 285 ntBASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC119751.5-201ENST00000514077 770 ntBASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 MTCYBP13-201ENST00000578634 1093 ntBASIC3.89□□□□□ -1.79
VPS13CQ709C8 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC019206.1-201ENST00000621938 425 ntBASIC3.89□□□□□ -1.79
VPS13CQ709C8 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 ADAM24P-201ENST00000398655 2101 ntBASIC3.89□□□□□ -1.79
VPS13CQ709C8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS13CQ709C8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS13CQ709C8 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VPS13CQ709C8 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS13CQ709C8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms