Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 EIF5A2P1-201ENST00000564027 460 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX4Q06945 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX4Q06945 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX4Q06945 AC068790.7-201ENST00000602347 528 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 AL078623.1-201ENST00000602702 907 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 C8orf59P2-201ENST00000603441 271 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 AC006566.1-201ENST00000608943 513 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 AL592494.3-201ENST00000609485 464 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 Y_RNA.804-201ENST00000615262 101 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 MIR6071-201ENST00000616741 78 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 AC073488.6-201ENST00000632293 754 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX4Q06945 AC062029.1-202ENST00000606164 3651 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 AC005332.9-201ENST00000620266 2921 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.88□□□□□ -1.31
SOX4Q06945 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.88□□□□□ -1.31
SOX4Q06945 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 MAPK10-344ENST00000641718 3746 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SOX4Q06945 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX4Q06945 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX4Q06945 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX4Q06945 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX4Q06945 HSPD1P9-201ENST00000420325 1636 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.87□□□□□ -1.31
SOX4Q06945 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX4Q06945 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX4Q06945 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.87□□□□□ -1.31
SOX4Q06945 AL354685.2-201ENST00000448218 1447 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.87□□□□□ -1.31
SOX4Q06945 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SOX4Q06945 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX4Q06945 SNORD16-201ENST00000362803 99 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 RNA5SP27-201ENST00000363839 119 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 RN7SKP237-201ENST00000364663 301 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 RNU4-91P-201ENST00000364778 135 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX4Q06945 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SOX4Q06945 RNA5SP115-201ENST00000411160 107 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX4Q06945 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX4Q06945 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX4Q06945 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.87□□□□□ -1.31
SOX4Q06945 OR5AW1P-201ENST00000426334 1006 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.87□□□□□ -1.31
SOX4Q06945 MTCO2P11-201ENST00000431069 680 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 AC007679.3-201ENST00000434035 414 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 AC008072.1-201ENST00000434254 824 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX4Q06945 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX4Q06945 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.87□□□□□ -1.31
SOX4Q06945 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX4Q06945 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX4Q06945 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.87□□□□□ -1.31
SOX4Q06945 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SOX4Q06945 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.87□□□□□ -1.31
SOX4Q06945 MTND3P10-201ENST00000450967 341 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 UBDP1-202ENST00000457888 382 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX4Q06945 RPS20P4-201ENST00000461659 355 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.87□□□□□ -1.31
SOX4Q06945 RN7SL643P-201ENST00000471845 291 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 RN7SL369P-201ENST00000477138 299 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 AP002884.1-201ENST00000479691 655 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 AC092824.1-201ENST00000483524 576 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX4Q06945 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX4Q06945 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX4Q06945 TCP11X3P-202ENST00000514289 1254 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.87□□□□□ -1.31
SOX4Q06945 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX4Q06945 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.87□□□□□ -1.31
SOX4Q06945 AC004217.3-201ENST00000551552 878 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 OR11J2P-201ENST00000555298 907 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX4Q06945 AL121579.2-201ENST00000555466 590 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.87□□□□□ -1.31
SOX4Q06945 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX4Q06945 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
SOX4Q06945 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SOX4Q06945 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.87□□□□□ -1.31
SOX4Q06945 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.87□□□□□ -1.31
SOX4Q06945 AC005332.4-201ENST00000592752 579 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 AL121757.2-201ENST00000611223 313 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 AC097641.3-201ENST00000613523 464 ntBASIC6.87□□□□□ -1.31
SOX4Q06945 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX4Q06945 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.87□□□□□ -1.31
SOX4Q06945 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.87□□□□□ -1.31
SOX4Q06945 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.87□□□□□ -1.31
SOX4Q06945 MFSD8-245ENST00000641743 948 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms